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Putative Salmonella enterica subsp. enterica serovar Typhi 424-2019_CI RM systems
Ref: Lagos,R.M. et al. unpublished
REBASE ref # 36987
Complete sequence: 4,777,787 bp
GenBank #: CP120398
REBASE acronym: Sen42420
Org_num: 68266
All begin PVA85_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
19245 | restriction endonuclease | |||
19250 | R | StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | Sen42420ORF19255P |
19255 | M | M.StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | M.Sen42420ORF19255P |
19260 | S | S.StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | S.Sen42420ORF19255P |
19265 | endoribonuclease SymE | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
2210 | DUF2556 family protein | |||
2215 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen42420ORF2215P |
2220 | DNA-binding transcriptional regulator Fis | |||
9160 | DUF4060 family protein | |||
9165 | M | M.StyTORF1926P (95% identity) | M.Sen42420ORF9165P | |
9170 | DGQHR domain-containing protein | |||
9225 | ead/Ea22-like family protein | |||
9230 | M | M.StyTORF1914P (100% identity) | ATGCAT | M.Sen42420ORF9230P |
9235 | DUF550 domain-containing protein | |||
14490 | drug/metabolite exporter YedA | |||
14495 | V | V.StyTDcmP (100% identity) | CCWGG | V.Sen42420DcmP |
14500 | M | M.StyTDcmP (100% identity) | CCWGG | M.Sen42420DcmP |
14505 | phosphohydrolase | |||
19380 | YebC/PmpR family DNA-binding transcriptional | |||
19385 | R | Senst12ORF9665P (100% identity) | Sen42420ORF19385P | |
19390 | 64 aa hypothetical protein | |||
20475 | 3-5 exonuclease | |||
20480 | M | M.StyTORF4329P (100% identity) | GATC | M.Sen42420ORF20480P |
20485 | replication endonuclease | |||
22145 | TraR/DksA family transcriptional regulator | |||
22150 | M | M.StyTORF3409P (100% identity) | GATC | M.Sen42420ORF22150P |
22155 | replication endonuclease | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
6230 | MFS transporter | |||
6235 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen42420ORF6235P |
6240 | R | StyTORF2507P (99% identity) | CAGAG | Sen42420ORF6235P |
6245 | small effector SsaA | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
19240 | BrnT family toxin | |||
19245 | R | StyTMrrP (100% identity) | Sen42420MrrP | |
19250 | type I restriction-modification system |