Salmonella enterica subsp. enterica serovar Typhi 314-2017_CO_03 |
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Putative Salmonella enterica subsp. enterica serovar Typhi 314-2017_CO_03 RM systems
Ref: Lagos,R.M. et al. unpublished
REBASE ref # 36987
Complete sequence: 4,782,091 bp
GenBank #: CP120399
REBASE acronym: SenCO03
Org_num: 68265
All begin PVA79_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19220 | restriction endonuclease | |||
| 19225 | R | StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | SenCO03ORF19230P |
| 19230 | M | M.StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | M.SenCO03ORF19230P |
| 19235 | S | S.StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | S.SenCO03ORF19230P |
| 19240 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2210 | DUF2556 family protein | |||
| 2215 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenCO03ORF2215P |
| 2220 | DNA-binding transcriptional regulator Fis | |||
| 8860 | phosphohydrolase | |||
| 8865 | M | M.StyTDcmP (100% identity) | CCWGG | M.SenCO03DcmP |
| 8870 | V | V.StyTDcmP (100% identity) | CCWGG | V.SenCO03DcmP |
| 8875 | drug/metabolite exporter YedA | |||
| 14110 | DUF550 domain-containing protein | |||
| 14115 | M | M.StyTORF1914P (100% identity) | ATGCAT | M.SenCO03ORF14115P |
| 14120 | ead/Ea22-like family protein | |||
| 14175 | DGQHR domain-containing protein | |||
| 14180 | M | M.StyTORF1926P (95% identity) | M.SenCO03ORF14180P | |
| 14185 | DUF4060 family protein | |||
| 19355 | YebC/PmpR family DNA-binding transcriptional | |||
| 19360 | R | Senst12ORF9665P (100% identity) | SenCO03ORF19360P | |
| 19365 | 64 aa hypothetical protein | |||
| 20440 | 3-5 exonuclease | |||
| 20445 | M | M.StyTORF4329P (100% identity) | GATC | M.SenCO03ORF20445P |
| 20450 | replication endonuclease | |||
| 22110 | TraR/DksA family transcriptional regulator | |||
| 22115 | M | M.StyTORF3409P (100% identity) | GATC | M.SenCO03ORF22115P |
| 22120 | replication endonuclease | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8775 | shufflon system plasmid conjugative transfer | |||
| 8780 | R | StyTORF872P (100% identity) | CAAACC | SenCO03ORF8785P |
| 8785 | M | M.SmaBWH35ORF16840P (100% identity) | CAAACC | M.SenCO03ORF8785P |
| 8790 | SpnT protein | |||
| 17100 | small effector SsaA | |||
| 17105 | R | Senr1ORF17185P (100% identity) | CAGAG | SenCO03ORF17110P |
| 17110 | M | M.StyTORF2507P (100% identity) | CAGAG | M.SenCO03ORF17110P |
| 17115 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19215 | BrnT family toxin | |||
| 19220 | R | StyTMrrP (100% identity) | SenCO03MrrP | |
| 19225 | type I restriction-modification system | |||