Pseudomonas amygdali pv. lachrymans YM7902 |
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Putative Pseudomonas amygdali pv. lachrymans YM7902 RM systems
Ref: Baltrus,D.A. unpublished
REBASE ref # 29117
| Sequence length: | GenBank #: | |
| Chromosome: | 6,122,931 bp | CP127045 |
| plasmid pPlaYM7902A: | 445,381 bp | CP127046 |
| plasmid pPlaYM7902B: | 77,752 bp | CP127047 |
REBASE acronym: Pam902
Org_num: 68176
All begin QO021_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2555 | 142 aa hypothetical protein | |||
| 2560 | R | Pam744ORF24330P (100% identity) | Pam902ORF2570P | |
| 2565 | S | S.Pam744ORF24330P (66% identity) | S.Pam902ORF2570P | |
| 2570 | M | M.Pam744ORF24330P (100% identity) | M.Pam902ORF2570P | |
| 2575 | HAD family hydrolase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8130 | glutamine-hydrolyzing GMP synthase | |||
| 8135 | M | M.PamNM002ORF7565P (100% identity) | M.Pam902ORF8135P | |
| 8140 | R | PamNM002ORF7565P (100% identity) | GGCGCC | Pam902ORF8135P |
| 8145 | tetratricopeptide repeat protein | |||
| 8990 | translesion error-prone DNA polymerase V | |||
| 8995 | M | M.PamNM002ORF8430P (100% identity) | M.Pam902ORF8995P | |
| 9000 | 131 aa hypothetical protein | |||
| 9655 | metallophosphoesterase | |||
| 9660 | M | M1.PamNM002ORF9170P (100% identity) | M.Pam902ORF9660P | |
| 9665 | 205 aa hypothetical protein | |||
| 16505 | 202 aa hypothetical protein | |||
| 16510 | M | M.Pams11528ORF11595P (38% identity) | M.Pam902ORF16510P | |
| 16515 | DUF1566 domain-containing protein | |||
| 17175 | HNH endonuclease | |||
| 17180 | M | M.Pam8ORF13215P (100% identity) | M.Pam902ORF17180P | |
| 17185 | 142 aa hypothetical protein | |||
| 18170 | IS5 family transposase | |||
| 18175 | M | M.Pam351ORF1874P (100% identity) | M.Pam902ORF18175P | |
| 18180 | 267 aa hypothetical protein | |||
| 23220 | 103 aa hypothetical protein | |||
| 23225 | R | PamNM002ORF4140P (100% identity) | GTCGAC | Pam902ORF23230P |
| 23230 | M | M.PamNM002ORF4140P (100% identity) | GTCGAC | M.Pam902ORF23230P |
| 23235 | plasmid-related protein | |||
| 27740 | NYN domain-containing protein | |||
| 27745 | M | M.Pam8ORF35P (99% identity) | M.Pam902ORF27745AP | |
| 27750 | IS5 family transposase | |||
| 27755 | M | M.Pam744ORF11185BP (98% identity) | M.Pam902ORF27745BP | |
| 27760 | DUF262 domain-containing protein | |||
| plasmid pPlaYM7902A | ||||
| 28350 | 129 aa hypothetical protein | |||
| 28355 | R | Pam7902I (100% identity) | GCNNGC | Pam902ORF28355P |
| 28360 | 124 aa hypothetical protein | |||
| 29620 | 133 aa hypothetical protein | |||
| 29625 | M | M.Pam7902ORF3420P (100% identity) | M.Pam902ORF29625P | |
| 29630 | 220 aa hypothetical protein | |||
| plasmid pPlaYM7902B | ||||
| 30615 | plasmid-related protein | |||
| 30620 | M | M.Psy76ORF28500P (100% identity) | CGGCCG | M.Pam902ORF30620P |
| 30625 | R | Psy6109ORF1042P (100% identity) | CGGCCG | Pam902ORF30620P |
| 30630 | resolvase-like protein | |||