Citrobacter freundii CRNMS1 |
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Putative Citrobacter freundii CRNMS1 RM systems
Ref: Fang,H. unpublished
REBASE ref # 36916
| Sequence length: | GenBank #: | |
| Chromosome: | 5,321,851 bp | CP126536 |
| plasmid pblaNDM5-S1: | 197,210 bp | CP126537 |
REBASE acronym: CfrS1
Org_num: 67914
All begin QOK75_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5485 | IS1 family transposase | |||
| 5490 | R | CfrF3419ORF9060P (100% identity) | AAGANNNNNCTC | CfrS1ORF5500P |
| 5495 | S | S.Eco29C15ORF5625P (100% identity) | AAGANNNNNCTC | S.CfrS1ORF5500P |
| 5500 | M | M.CfrF3419ORF9060P (100% identity) | AAGANNNNNCTC | M.CfrS1ORF5500P |
| 5505 | 119 aa hypothetical protein | |||
| 21910 | 136 aa hypothetical protein | |||
| 21915 | R | CfrF4321ORF10455P (100% identity) | CfrS1ORF21920P | |
| 21920 | M | M.CfrZS47ORF21595P (100% identity) | M.CfrS1ORF21920P | |
| 21925 | S | S.CfrZS47ORF21595P (100% identity) | S.CfrS1ORF21920P | |
| 21930 | thymidylate synthase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 470 | DUF262 domain-containing protein | |||
| 475 | RM | KspBL05ORF41950AP (100% identity) | AGGAAG | CfrS1ORF475P |
| 480 | 179 aa hypothetical protein | |||
| 485 | reverse transcriptase domain-containing protein | |||
| 490 | RM | KspBL02ORF42510BP (100% identity) | CfrS1ORF490P | |
| 495 | BREX-1 system phosphatase PglZ type A | |||
| 2175 | cell division protein DamX | |||
| 2180 | M | M.Eco5172DamP (100% identity) | GATC | M.CfrS1DamP |
| 2185 | ribulose-phosphate 3-epimerase | |||
| 2720 | DUF2556 family protein | |||
| 2725 | M | M.CfrZS47ORF2675P (100% identity) | ATGCAT | M.CfrS1ORF2725P |
| 2730 | DNA-binding transcriptional regulator Fis | |||
| 7665 | 147 aa hypothetical protein | |||
| 7670 | M | M.CfrZS47ORF7815P (100% identity) | M.CfrS1ORF7670P | |
| 7675 | 72 aa hypothetical protein | |||
| 8110 | type II toxin-antitoxin system death-on-curing | |||
| 8115 | M | M.CfrZS47ORF8260P (100% identity) | M.CfrS1ORF8115P | |
| 8120 | replication endonuclease | |||
| 8120 | replication endonuclease | |||
| 8125 | M | M.CfrF3419ORF6425P (100% identity) | M1.CfrS1ORF8125P | |
| 8130 | 57 aa hypothetical protein | |||
| 8135 | 89 aa hypothetical protein | |||
| 8140 | 65 aa hypothetical protein | |||
| 8145 | M | M.CfrF3419ORF6405P (100% identity) | M2.CfrS1ORF8125P | |
| 8150 | 3-5 exonuclease | |||
| 10090 | phosphohydrolase | |||
| 10095 | M | M.CfrZS47ORF10210P (100% identity) | CCWGG | M.CfrS1ORF10095P |
| 10100 | V | V.CfrF3419ORF4450P (100% identity) | V.CfrS1ORF10095P | |
| 10105 | drug/metabolite exporter YedA | |||
| 12000 | 72 aa hypothetical protein | |||
| 12005 | M | M.CfrZS47ORF14380P (100% identity) | M.CfrS1ORF12005P | |
| 12010 | 94 aa hypothetical protein | |||
| 16250 | 143 aa hypothetical protein | |||
| 16255 | M | M.YrupYR1ORFCP (100% identity) | CCNGG | M.CfrS1ORF16255P |
| 16260 | 100 aa hypothetical protein | |||
| 16750 | 70 aa hypothetical protein | |||
| 16755 | M | M.CfrZS47ORF16765P (100% identity) | M.CfrS1ORF16755P | |
| 16760 | DUF3850 domain-containing protein | |||
| 18675 | 3-5 exonuclease | |||
| 18680 | M | M.CfrF3419ORF22285P (100% identity) | M.CfrS1ORF18680P | |
| 18685 | 71 aa hypothetical protein | |||
| 18700 | replication endonuclease | |||
| 18705 | M | M.CfrZS47ORF8260P (100% identity) | M.CfrS1ORF18705P | |
| 18710 | type II toxin-antitoxin system death-on-curing | |||
| 21815 | endoribonuclease SymE | |||
| 21820 | R | Cfri0ORF4248P (98% identity) | CfrS1ORF21820P | |
| 21825 | helix-turn-helix transcriptional regulator | |||
| 23220 | 73 aa hypothetical protein | |||
| 23225 | M | M.Eco35152ORF23995P (100% identity) | M.CfrS1ORF23225P | |
| 23230 | SOS response-associated peptidase family | |||
| 25335 | ImmA/IrrE family metallo-endopeptidase | |||
| 25340 | M | M.CfrM92ORF25085P (100% identity) | M.CfrS1ORF25340P | |
| 25345 | replication endonuclease | |||
| plasmid pblaNDM5-S1 | ||||
| 26995 | IS1 family transposase | |||
| 27000 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.CfrS1ORF27000P |
| 27005 | R | YpsR1ORFAP (100% identity) | CCWGG | CfrS1ORF27000P |
| 27010 | EAL domain-containing protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 25355 | DUF4406 domain-containing protein | |||
| 25360 | M | M.CfrF3419ORF15595P (100% identity) | M.CfrS1ORF25360P | |
| 25365 | 82 aa hypothetical protein | |||