Kingella negevensis D2292 |
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Putative Kingella negevensis D2292 RM systems
Ref: Morreale,D.P. et al. unpublished
REBASE ref # 36937
Complete sequence: 2,201,616 bp
GenBank #: CP123447
REBASE acronym: KneD2292
Org_num: 68022
All begin QEO94_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 630 | diaminopimelate decarboxylase | |||
| 635 | S | S.Kne8426ORFBP (68% identity) | S.KneD2292ORF635P | |
| 640 | 144 aa hypothetical protein | |||
| 6870 | xanthine permease | |||
| 6875 | S | S.Kne8426ORFMP (94% identity) | S.KneD2292ORF6875P | |
| 6880 | YdcH family protein | |||
| 11470 | threonine--tRNA ligase | |||
| 11475 | R | Mov11969IP (78% identity) | KneD2292ORF11485P | |
| 11480 | S | S2.Kne8426ORF4355P (46% identity) | S.KneD2292ORF11485P | |
| 11485 | M | M.Kne8426ORFHP (98% identity) | M.KneD2292ORF11485P | |
| 11490 | zf-HC2 domain-containing protein | |||
| 11585 | TatD family hydrolase | |||
| 11590 | S | S2.Kne8426ORF4355P (47% identity) | S.KneD2292ORF11590P | |
| 11595 | 83 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 195 | helix-turn-helix transcriptional regulator | |||
| 200 | M | M.Kne8426DndCP (97% identity) | M.KneD2292DndCP | |
| 205 | 73 aa hypothetical protein | |||
| 205 | 73 aa hypothetical protein | |||
| 210 | M | M.Kne8426DndDP (98% identity) | M.KneD2292DndDP | |
| 215 | FtsK/SpoIIIE domain-containing protein | |||
| 210 | AAA family ATPase | |||
| 215 | R | Kne8426DptHP (99% identity) | KneD2292DptHP | |
| 220 | DUF2130 domain-containing protein | |||
| 1720 | VENN motif pre-toxin domain-containing protein | |||
| 1725 | M | M.KneD2292ORF8095P (100% identity) | M.KneD2292ORF1725P | |
| 1730 | 153 aa hypothetical protein | |||
| 6020 | peptide chain release factor 1 | |||
| 6025 | R | Smu29453ORF109P (95% identity) | KneD2292ORF6030P | |
| 6030 | M | M.Smu29453ORF109P (98% identity) | M.KneD2292ORF6030P | |
| 6035 | type I methionyl aminopeptidase | |||
| 7255 | IS1595 family transposase | |||
| 7260 | M | M.AcrS6ORF9980P (49% identity) | M.KneD2292ORF7260P | |
| 7265 | Com family DNA-binding transcriptional | |||
| 7765 | IS630 family transposase | |||
| 7770 | S | S.Kne8426ORFJP (99% identity) | S.KneD2292ORF7775P | |
| 7775 | RM | Kne8426ORFIP (98% identity) | KneD2292ORF7775P | |
| 7780 | transposase | |||
| 8090 | 153 aa hypothetical protein | |||
| 8095 | M | M.KneD2292ORF1725P (100% identity) | M.KneD2292ORF8095P | |
| 8100 | terminase small subunit | |||
| 8930 | 16S rRNA (cytosine(967)-C(5))-methyltransferase | |||
| 8935 | RM | Kne8426ORFAP (98% identity) | KneD2292ORF8935P | |
| 8940 | methionyl-tRNA formyltransferase | |||
| 9325 | molybdenum carrier protein | |||
| 9330 | R | Kki13331IP (96% identity) | GGATG | KneD2292ORF9335P |
| 9335 | M | M1.KkiCHCORF3555P (99% identity) | GGATG | M1.KneD2292ORF9335P |
| 9340 | M | M2.KkiCHCORF3555P (99% identity) | GGATG | M2.KneD2292ORF9335P |
| 9345 | FAD/FMN-binding oxidoreductase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8360 | lysozyme | |||
| 8365 | R | Hha21621ORF50P (91% identity) | KneD2292ORF8370P | |
| 8370 | M | M.Mno869ORF8300P (75% identity) | M.KneD2292ORF8370P | |
| 8380 | 159 aa hypothetical protein | |||
| 10420 | amino acid permease | |||
| 10425 | R | Kne8426ORFGP (98% identity) | KneD2292ORF10430P | |
| 10430 | M | M.Kne8426ORFGP (93% identity) | M.KneD2292ORF10430P | |
| 10435 | 43 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5065 | excinuclease ABC subunit UvrA | |||
| 5070 | R | CphBGmrSDP (29% identity) | KneD2292GmrSDAP | |
| 5075 | R | Gpa4GmrSDP (21% identity) | KneD2292GmrSDBP | |
| 5080 | IS1 family transposase | |||