Kingella negevensis SW7208426 |
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Putative Kingella negevensis SW7208426 RM systems
Ref: Morreale,D.P. et al. unpublished
REBASE ref # 36937
Complete sequence: 2,142,207 bp
GenBank #: CP123448
REBASE acronym: Kne8426
Org_num: 25228
All begin QEO93_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3415 | N-6 DNA methylase | |||
| 3420 | S | S.KneD2292ORF7775P (99% identity) | S.Kne8426ORFJP | |
| 3425 | iron-sulfur cluster carrier protein ApbC | |||
| 4230 | threonine--tRNA ligase | |||
| 4235 | R | Kne8426ORFKBP (98% identity) | Kne8426ORFHBP | |
| 4240 | IS5 family transposase | |||
| 4245 | R | Kne8426ORFKAP (99% identity) | Kne8426ORFHAP | |
| 4250 | S | S.Kne8426ORFLP (47% identity) | S.Kne8426ORFHP | |
| 4255 | M | M.KneD2292ORF11485P (98% identity) | M.Kne8426ORFHP | |
| 4260 | zf-HC2 domain-containing protein | |||
| 4350 | TatD family hydrolase | |||
| 4355 | S | S.Kne8426ORFLP (63% identity) | S1.Kne8426ORF4355P | |
| 4360 | transposase | |||
| 4365 | IS5 family transposase | |||
| 4370 | S | S.KneD2292ORF11485P (46% identity) | S2.Kne8426ORF4355P | |
| 4375 | ABC transporter substrate-binding protein | |||
| 10410 | 144 aa hypothetical protein | |||
| 10415 | S | S.KneD2292ORF635P (68% identity) | S.Kne8426ORFBP | |
| 10420 | diaminopimelate decarboxylase | |||
| 11145 | 56 aa hypothetical protein | |||
| 11150 | S | S.KneD2292ORF6875P (94% identity) | S.Kne8426ORFMP | |
| 11155 | YdcH family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1590 | FAD/FMN-binding oxidoreductase | |||
| 1595 | M | M2.Kki66ORF6855P (96% identity) | M1.Kne8426ORFDP | |
| 1600 | 116 aa hypothetical protein | |||
| 1605 | R | Nmu758ORF7870P (70% identity) | Kne8426ORFDP | |
| 1610 | M | M.Nmu758ORF7870P (89% identity) | M2.Kne8426ORFDP | |
| 1615 | molybdenum carrier protein | |||
| 2250 | 16S rRNA (cytosine(967)-C(5))-methyltransferase | |||
| 2255 | RM | Kki23332ORF6375P (98% identity) | Kne8426ORFAP | |
| 2260 | methionyl-tRNA formyltransferase | |||
| 2435 | iron chelate uptake ABC transporter family | |||
| 2440 | M | M.Mno869ORF3790P (71% identity) | M.Kne8426ORFEP | |
| 2445 | 118 aa hypothetical protein | |||
| 3410 | IS1595 family transposase | |||
| 3415 | RM | KneD2292ORF7775P (98% identity) | Kne8426ORFIP | |
| 3420 | restriction endonuclease subunit S | |||
| 9980 | 40 aa hypothetical protein | |||
| ??? | RM | Kki434ORFBP (79% identity) | Kne8426ORFCP | |
| 9995 | transposase | |||
| 10795 | DUF2130 domain-containing protein | |||
| 10800 | R | KneD2292DptHP (99% identity) | Kne8426DptHP | |
| 10805 | AAA family ATPase | |||
| 10800 | FtsK/SpoIIIE domain-containing protein | |||
| 10805 | M | M.Kki66DndDP (98% identity) | M.Kne8426DndDP | |
| 10810 | 73 aa hypothetical protein | |||
| 10810 | 73 aa hypothetical protein | |||
| 10815 | M | M.Kki23332DndCP (100% identity) | M.Kne8426DndCP | |
| 10820 | helix-turn-helix transcriptional regulator | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 590 | ubiquinone biosynthesis regulatory protein | |||
| 595 | M | M.KneD2292ORF10430P (93% identity) | M.Kne8426ORFGP | |
| 600 | R | KneD2292ORF10430P (98% identity) | Kne8426ORFGP | |
| 605 | basic amino acid/polyamine antiporter | |||
| 1665 | site-specific integrase | |||
| ??? | M | M.NdeIII (70% identity) | M.Kne8426ORFFP | |
| 1680 | R | Kki66ORF10495P (96% identity) | Kne8426ORFFP | |
| 1685 | 43 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5025 | type II toxin-antitoxin system VapC family | |||
| 5030 | R | Kki66MrrP (100% identity) | Kne8426MrrP | |
| 5035 | phenylalanine--tRNA ligase subunit beta | |||