Escherichia coli XJ5.1 |
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Putative Escherichia coli XJ5.1 RM systems
Ref: Wang,W. and Zhang,J. unpublished
REBASE ref # 36933
| Sequence length: | GenBank #: | |
| Chromosome: | 4,835,105 bp | CP073698 |
| plasmid unnamed1: | 80,112 bp | CP073699 |
| plasmid unnamed2: | 92,798 bp | CP073700 |
| plasmid unnamed3: | 95,907 bp | CP073701 |
REBASE acronym: EcoXJ51
Org_num: 68002
All begin KEM37_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20295 | AAA family ATPase | |||
| 20300 | S | S.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | S.EcoXJ51ORF20305P |
| 20305 | M | M.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | M.EcoXJ51ORF20305P |
| 20310 | R | SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | EcoXJ51ORF20305P |
| 20315 | transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1660 | cell division protein DamX | |||
| 1665 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoXJ51DamP |
| 1670 | ribulose-phosphate 3-epimerase | |||
| 9650 | TrmB family transcriptional regulator | |||
| 9655 | M | M.Eco2DORF8560P (98% identity) | M.EcoXJ51ORF9655P | |
| 9660 | phage holin, lambda family | |||
| 13660 | drug/metabolite exporter YedA | |||
| 13665 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcoXJ51DcmP |
| 13670 | M | M.SflWW1DcmP (100% identity) | CCWGG | M.EcoXJ51DcmP |
| 13675 | phosphohydrolase | |||
| 19505 | HNH endonuclease | |||
| 19510 | R | Eco112019ORF11405P (100% identity) | EcoXJ51ORF19510P | |
| 19515 | 100 aa hypothetical protein | |||
| plasmid unnamed1 | ||||
| 23300 | 73 aa hypothetical protein | |||
| 23305 | M | M.Eco4423ORFLP (100% identity) | SAY | M.EcoXJ51ORF23305P |
| 23310 | 102 aa hypothetical protein | |||
| plasmid unnamed2 | ||||
| 23970 | 73 aa hypothetical protein | |||
| 23975 | M | M.Ssp14523ORF22990P (100% identity) | M.EcoXJ51ORF23975P | |
| 23980 | 103 aa hypothetical protein | |||
| plasmid unnamed3 | ||||
| 24450 | transposase | |||
| 24455 | M | M.EcoTH9F11ORF26070P (98% identity) | M.EcoXJ51ORF24455P | |
| 24460 | recombination-associated protein RdgC | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19515 | 100 aa hypothetical protein | |||
| 19520 | R | Eco1575ORF3270P (100% identity) | GAGCC | EcoXJ51ORF19525P |
| 19525 | M | M.Eco112019ORF11420P (100% identity) | GAGCC | M.EcoXJ51ORF19525P |
| 19530 | DEAD/DEAH box helicase family protein | |||