Salmonella enterica subsp. enterica CY16 |
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Putative Salmonella enterica subsp. enterica CY16 RM systems
Ref: Cao,G. unpublished
REBASE ref # 28456
| Sequence length: | GenBank #: | |
| Chromosome: | 4,694,955 bp | CP126323 |
| plasmid pCY16A: | 86,649 bp | CP126324 |
REBASE acronym: SenCY16
Org_num: 68240
All begin QN087_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3785 | type I restriction endonuclease | |||
| 3790 | S | S.Ssp1806ORF19520P (100% identity) | GGYANNNNNNTCG | S.SenCY16ORF3795P |
| 3795 | M | M.StySBLI (100% identity) | GGYANNNNNNTCG | M.SenCY16ORF3795P |
| 3800 | restriction endonuclease | |||
| 3805 | 44 aa hypothetical protein | |||
| 3810 | M | M.Ssp1806ORF19505P (100% identity) | M.SenCY16ORF3810P | |
| 3815 | restriction endonuclease subunit S | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3675 | IS3 family transposase | |||
| 3680 | R | Sen67ORF4470P (100% identity) | SenCY16ORF3680P | |
| 3685 | YebC/PmpR family DNA-binding transcriptional | |||
| 13335 | drug/metabolite exporter YedA | |||
| 13340 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.SenCY16DcmP |
| 13345 | M | M.Ssp1806DcmP (100% identity) | CCWGG | M.SenCY16DcmP |
| 13350 | phosphohydrolase | |||
| 17800 | replication endonuclease | |||
| 17805 | M | M.Sen9120ORF17650P (100% identity) | GATC | M.SenCY16ORF17805P |
| 17810 | TraR/DksA family transcriptional regulator | |||
| 20995 | DNA-binding transcriptional regulator Fis | |||
| 21000 | M | M.Ssp1806ORF2265P (100% identity) | ATGCAT | M.SenCY16ORF21000P |
| 21005 | DUF2556 family protein | |||
| plasmid pCY16A | ||||
| 23050 | 93 aa hypothetical protein | |||
| 23055 | M | M.Ssp1806ORF23305P (100% identity) | M.SenCY16ORF23055P | |
| 23060 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16860 | small effector SsaA | |||
| 16865 | R | Ssp1806ORF16970P (100% identity) | CAGAG | SenCY16ORF16870P |
| 16870 | M | M.Sen9120ORF16750P (100% identity) | CAGAG | M.SenCY16ORF16870P |
| 16875 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3795 | class I SAM-dependent DNA methyltransferase | |||
| 3800 | R | Ssp1806MrrP (100% identity) | SenCY16MrrP | |
| 3805 | 44 aa hypothetical protein | |||