Clostridioides difficile CDI-30 |
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Putative Clostridioides difficile CDI-30 RM systems
Ref: Adamczyk,M. et al. unpublished
REBASE ref # 36918
Complete sequence: 4,159,444 bp
GenBank #: CP126067
REBASE acronym: Cdi30
Org_num: 67922
All begin ITI90_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 16340 | 56 aa hypothetical protein | |||
| 16345 | R | Pdi30ORF18845P (100% identity) | ATTYNNNNNCTTC | Cdi30ORF16360P |
| 16350 | 423 aa hypothetical protein | |||
| 16355 | S | S.Pdi30ORF18845P (100% identity) | ATTYNNNNNCTTC | S.Cdi30ORF16360P |
| 16360 | M | M.CdiS122ORF3110P (100% identity) | ATTYNNNNNCTTC | M.Cdi30ORF16360P |
| 16365 | 115 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1665 | 58 aa hypothetical protein | |||
| 1670 | M | M.CdiS122ORF7470P (100% identity) | M.Cdi30ORF1670P | |
| 1675 | 69 aa hypothetical protein | |||
| 14500 | patatin-like phospholipase family protein | |||
| 14505 | M | M.PdiZ31ORF1541P (100% identity) | CAAAAA | M.Cdi30ORF14505P |
| 14510 | Rrf2 family transcriptional regulator | |||
| 16175 | class B sortase | |||
| 16180 | M | M.Pdi6602ORF710333P (100% identity) | GCNGC | M.Cdi30ORF16180P |
| 16185 | DrmE family protein | |||
| 16255 | 383 aa hypothetical protein | |||
| 16260 | M | M1.Pdi30ORF18765P (100% identity) | CATCG | M1.Cdi30ORF16260P |
| 16265 | M | M2.CdiS122ORF3010P (100% identity) | CATCG | M2.Cdi30ORF16260P |
| 16270 | recombinase family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10665 | sigma 54-interacting transcriptional regulator | |||
| 10670 | R | Pdi30McrCP (100% identity) | Cdi30McrCP | |
| 10675 | R | Pdi30McrBP (100% identity) | Cdi30McrBP | |
| 10680 | cell division protein | |||