Clostridioides difficile CDI-23 |
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Putative Clostridioides difficile CDI-23 RM systems
Ref: Adamczyk,M. et al. unpublished
REBASE ref # 36918
Complete sequence: 4,139,584 bp
GenBank #: CP126071
REBASE acronym: Cdi23
Org_num: 67920
All begin ITI96_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2485 | 53 aa hypothetical protein | |||
| 2490 | C | C.PdiZ31ORF415P (100% identity) | C.Cdi23ORF2495P | |
| 2495 | RM | Cdo002IV (99% identity) | GCMGAAG | Cdi23ORF2495P |
| 2500 | 224 aa hypothetical protein | |||
| 3535 | SrtB-anchored collagen-binding adhesin | |||
| 3540 | M | M.CdiCd13ORF3645P (100% identity) | M.Cdi23ORF3540P | |
| 3545 | YdcP family protein | |||
| 14330 | patatin-like phospholipase family protein | |||
| 14335 | M | M.PdiZ31ORF1541P (100% identity) | CAAAAA | M.Cdi23ORF14335P |
| 14340 | Rrf2 family transcriptional regulator | |||
| 16085 | 50 aa hypothetical protein | |||
| 16090 | M | M.CdiST42DndCP (100% identity) | M.Cdi23DndCP | |
| 16095 | AAA family ATPase | |||
| 16090 | DNA phosphorothioation system sulfurtransferase | |||
| 16095 | M | M.CdiST42DndDP (100% identity) | M.Cdi23DndDP | |
| 16100 | DndE family protein | |||
| 16095 | AAA family ATPase | |||
| 16100 | M | M.CdiCd24DndEP (100% identity) | M.Cdi23DndEP | |
| ??? | DNA phosphorothioation-dependent restriction protein DptH | |||
| 16100 | DndE family protein | |||
| ??? | R | CdiST42DptHP (100% identity) | Cdi23DptHP | |
| 16115 | DNA phosphorothioation-dependent restriction | |||
| ??? | DNA phosphorothioation-dependent restriction protein DptH | |||
| 16115 | R | CdiST42DptGP (100% identity) | Cdi23DptGP | |
| 16120 | DNA phosphorothioation-dependent restriction | |||
| 16115 | DNA phosphorothioation-dependent restriction | |||
| 16120 | R | CdiST42DptFP (100% identity) | Cdi23DptFP | |
| 16125 | 90 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10465 | sigma 54-interacting transcriptional regulator | |||
| 10470 | R | Cdo002McrCP (100% identity) | Cdi23McrCP | |
| 10475 | R | Pdi6602McrBP (100% identity) | Cdi23McrBP | |
| 10480 | cell division protein | |||