Clostridioides difficile CDI-22 |
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Putative Clostridioides difficile CDI-22 RM systems
Ref: Adamczyk,M. et al. unpublished
REBASE ref # 36918
Complete sequence: 4,141,211 bp
GenBank #: CP126072
REBASE acronym: Cdi22
Org_num: 67919
All begin ITI92_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 16145 | 47 aa hypothetical protein | |||
| 16150 | R | CdiS0942ORF16230P (100% identity) | AYGNNNNNNCTG | Cdi22ORF16175P |
| 16155 | 300 aa hypothetical protein | |||
| 16160 | 97 aa hypothetical protein | |||
| 16165 | 150 aa hypothetical protein | |||
| 16170 | S | S.PdiBJ08ORFAP (100% identity) | AYGNNNNNNCTG | S.Cdi22ORF16175P |
| 16175 | M | M.CdiRSS2ORF3900P (100% identity) | AYGNNNNNNCTG | M.Cdi22ORF16175P |
| 16180 | DEAD/DEAH box helicase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 14135 | patatin-like phospholipase family protein | |||
| 14140 | M | M.PdiZ31ORF1541P (100% identity) | CAAAAA | M.Cdi22ORF14140P |
| 14145 | Rrf2 family transcriptional regulator | |||
| 16270 | Eco57I restriction-modification methylase | |||
| 16275 | M | M.CdiEW6IV (100% identity) | GAGGAG | M.Cdi22ORF16275P |
| 16280 | 115 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10665 | sigma 54-interacting transcriptional regulator | |||
| 10670 | R | Pdi630McrCP (100% identity) | Cdi22McrCP | |
| 10675 | R | Pdi6602McrBP (100% identity) | Cdi22McrBP | |
| 10680 | cell division protein | |||
| 15520 | ECF transporter S component | |||
| 15525 | R | Pdi6602GmrSDP (100% identity) | Cdi22GmrSDP | |
| 15530 | DEAD/DEAH box helicase family protein | |||