Pseudomonas aeruginosa 2020CK-00194 |
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Putative Pseudomonas aeruginosa 2020CK-00194 RM systems
Ref: Hergert,J. et al. unpublished
REBASE ref # 35260
Complete sequence: 7,232,386 bp
GenBank #: CP123787
REBASE acronym: Pae194
Org_num: 68161
All begin L4671_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 410 | site-specific integrase | |||
| 415 | M | M.PaePA7II (100% identity) | AGANNNNNNNNTCAA | M.Pae194ORF415P |
| 420 | S | S.PaePA7II (100% identity) | AGANNNNNNNNTCAA | S.Pae194ORF415P |
| 425 | R | PaePA7IIP (100% identity) | AGANNNNNNNNTCAA | Pae194ORF415P |
| 430 | C | C.PspBYT5ORF19420P (100% identity) | C.Pae194ORF415P | |
| 435 | 196 aa hypothetical protein | |||
| 1825 | sigma 54-interacting transcriptional regulator | |||
| 1830 | R | PaeMF1ORF1540P (99% identity) | Pae194ORF1840P | |
| 1835 | DNA recombination protein RmuC | |||
| 1840 | M | M.Pfl13852ORFAP (100% identity) | M.Pae194ORF1840P | |
| 1845 | S | S.Pfl13852ORFAP (100% identity) | S1.Pae194ORF1840P | |
| 1850 | 48 aa hypothetical protein | |||
| 12260 | DNA-processing protein DprA | |||
| 12265 | M | M1.Pae973ORF12590P (100% identity) | M1.Pae194ORF12265P | |
| 12270 | M | M2.Pae973ORF12590P (100% identity) | M2.Pae194ORF12265P | |
| 12275 | S | S.Pae973ORF12590P (100% identity) | S.Pae194ORF12265P | |
| 12280 | R | Pae973ORF12590P (100% identity) | Pae194ORF12265P | |
| 12285 | AAA family ATPase | |||
| 24915 | IS3 family transposase | |||
| 24920 | R | PaeMF1ORF24740P (100% identity) | Pae194ORF24940P | |
| 24925 | 235 aa hypothetical protein | |||
| 24930 | AAA family ATPase | |||
| 24935 | S | S.PaeMF1ORF24740P (100% identity) | S.Pae194ORF24940P | |
| 24940 | M | M.PaeMF1ORF24740P (100% identity) | M.Pae194ORF24940P | |
| 24945 | helix-turn-helix domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1630 | 94 aa hypothetical protein | |||
| 1635 | M | M.PaesS1ORF1335P (100% identity) | M.Pae194ORF1635P | |
| 1640 | V | V.PaesS1ORF1335P (100% identity) | V.Pae194ORF1635P | |
| 1645 | DISARM system phospholipase D-like protein DrmC | |||
| 1655 | DISARM system helicase DrmA | |||
| 1660 | RM | PaesS1ORF1360P (100% identity) | Pae194ORF1660P | |
| 1665 | DISARM system SNF2-like helicase DrmD | |||
| 11660 | 213 aa hypothetical protein | |||
| 11665 | M | M.PaeYTSY4ORF6725P (100% identity) | M.Pae194ORF11665P | |
| 11670 | 159 aa hypothetical protein | |||
| 27180 | nucleoid-associated protein YejK | |||
| 27185 | M | M.PspHORFAP (100% identity) | M.Pae194ORF27185P | |
| 27190 | Arc family DNA-binding protein | |||
| 27670 | nucleoid-associated protein YejK | |||
| 27675 | M | M.PspAK6UORFCP (100% identity) | M.Pae194ORF27675P | |
| 27680 | Arc family DNA-binding protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 12280 | HsdR family type I site-specific | |||
| 12285 | R | Pae973McrBP (100% identity) | Pae194McrBP | |
| 12290 | R | Pae973McrCP (100% identity) | Pae194McrCP | |
| 12295 | 166 aa hypothetical protein | |||