Pseudomonas aeruginosa 2021CK-01305 |
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Putative Pseudomonas aeruginosa 2021CK-01305 RM systems
Ref: Hergert,J. et al. unpublished
REBASE ref # 35260
Complete sequence: 7,018,312 bp
GenBank #: CP123791
REBASE acronym: Pae12305
Org_num: 68164
All begin L4Q07_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 410 | site-specific integrase | |||
| 415 | M | M.PaePA7II (100% identity) | AGANNNNNNNNTCAA | M.Pae12305ORF415P |
| 420 | S | S.PaePA7II (100% identity) | AGANNNNNNNNTCAA | S.Pae12305ORF415P |
| 425 | R | PaePA7IIP (100% identity) | AGANNNNNNNNTCAA | Pae12305ORF415P |
| 430 | C | C.PspBYT5ORF19420P (100% identity) | C.Pae12305ORF415P | |
| 435 | 196 aa hypothetical protein | |||
| 1825 | sigma 54-interacting transcriptional regulator | |||
| 1830 | R | PaeMF1ORF1540P (100% identity) | Pae12305ORF1840P | |
| 1835 | DNA recombination protein RmuC | |||
| 1840 | M | M.Pfl13852ORFAP (100% identity) | M.Pae12305ORF1840P | |
| 1845 | S | S.Pfl13852ORFAP (100% identity) | S1.Pae12305ORF1840P | |
| 1850 | 48 aa hypothetical protein | |||
| 12975 | DNA-processing protein DprA | |||
| 12980 | M | M1.Pae973ORF12590P (100% identity) | M1.Pae12305ORF12980P | |
| 12985 | M | M2.Pae973ORF12590P (100% identity) | M2.Pae12305ORF12980P | |
| 12990 | S | S.Pae973ORF12590P (100% identity) | S.Pae12305ORF12980P | |
| 12995 | R | Pae973ORF12590P (100% identity) | Pae12305ORF12980P | |
| 13000 | AAA family ATPase | |||
| 24350 | IS3 family transposase | |||
| 24355 | R | PaeMF1ORF24740P (100% identity) | Pae12305ORF24375P | |
| 24360 | 235 aa hypothetical protein | |||
| 24365 | AAA family ATPase | |||
| 24370 | S | S.PaeMF1ORF24740P (100% identity) | S.Pae12305ORF24375P | |
| 24375 | M | M.PaeMF1ORF24740P (100% identity) | M.Pae12305ORF24375P | |
| 24380 | helix-turn-helix domain-containing protein | |||
| 31245 | endonuclease NucS | |||
| 31250 | S | S.PaesAG1ORF6375P (100% identity) | CACNNNNNNNRTGT | S.Pae12305ORF31255P |
| 31255 | M | M.PaesAG1ORF6375P (100% identity) | CACNNNNNNNRTGT | M.Pae12305ORF31255P |
| 31260 | HNH endonuclease signature motif containing | |||
| 31265 | R | PaesAG1ORF6375P (100% identity) | CACNNNNNNNRTGT | Pae12305ORF31255P |
| 31270 | peptidase M15 | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1630 | 94 aa hypothetical protein | |||
| 1635 | M | M.PaesS1ORF1335P (100% identity) | M.Pae12305ORF1635P | |
| 1640 | V | V.PaesS1ORF1335P (100% identity) | V.Pae12305ORF1635P | |
| 1645 | DISARM system phospholipase D-like protein DrmC | |||
| 1655 | DISARM system helicase DrmA | |||
| 1660 | RM | PaesS1ORF1360P (100% identity) | Pae12305ORF1660P | |
| 1665 | DISARM system SNF2-like helicase DrmD | |||
| 7530 | DUF4406 domain-containing protein | |||
| 7535 | M | M.PaeLo557ORF6850P (99% identity) | M.Pae12305ORF7535P | |
| 7540 | 100 aa hypothetical protein | |||
| 12375 | 213 aa hypothetical protein | |||
| 12380 | M | M.PaeYTSY4ORF6725P (100% identity) | M.Pae12305ORF12380P | |
| 12385 | 159 aa hypothetical protein | |||
| 25040 | helix-turn-helix domain-containing protein | |||
| 25045 | M | M.Sse17993ORFDP (86% identity) | M.Pae12305ORF25045P | |
| 25050 | V | V.Sse17993ORFDP (100% identity) | V.Pae12305ORF25045P | |
| 25055 | ATP-binding protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 12995 | HsdR family type I site-specific | |||
| 13000 | R | Pae973McrBP (100% identity) | Pae12305McrBP | |
| 13005 | R | Pae973McrCP (100% identity) | Pae12305McrCP | |
| 13010 | 166 aa hypothetical protein | |||