Pseudomonas aeruginosa 2021CK-01107 |
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Putative Pseudomonas aeruginosa 2021CK-01107 RM systems
Ref: Hergert,J. et al. unpublished
REBASE ref # 35260
Complete sequence: 7,040,329 bp
GenBank #: CP123793
REBASE acronym: Pae1107
Org_num: 68162
All begin L4V62_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 410 | site-specific integrase | |||
| 415 | M | M.PaePA7II (100% identity) | AGANNNNNNNNTCAA | M.Pae1107ORF415P |
| 420 | S | S.PaePA7II (100% identity) | AGANNNNNNNNTCAA | S.Pae1107ORF415P |
| 425 | R | PaePA7IIP (100% identity) | AGANNNNNNNNTCAA | Pae1107ORF415P |
| 430 | C | C.PspBYT5ORF19420P (100% identity) | C.Pae1107ORF415P | |
| 435 | 196 aa hypothetical protein | |||
| 1825 | sigma 54-interacting transcriptional regulator | |||
| 1830 | R | PaeMF1ORF1540P (100% identity) | Pae1107ORF1840P | |
| 1835 | DNA recombination protein RmuC | |||
| 1840 | M | M.Pfl13852ORFAP (100% identity) | M.Pae1107ORF1840P | |
| 1845 | S | S.Pfl13852ORFAP (100% identity) | S1.Pae1107ORF1840P | |
| 1850 | 48 aa hypothetical protein | |||
| 12320 | DNA-processing protein DprA | |||
| 12325 | M | M1.Pae973ORF12590P (100% identity) | M1.Pae1107ORF12325P | |
| 12330 | M | M2.Pae973ORF12590P (100% identity) | M2.Pae1107ORF12325P | |
| 12335 | S | S.Pae973ORF12590P (100% identity) | S.Pae1107ORF12325P | |
| 12340 | R | Pae973ORF12590P (100% identity) | Pae1107ORF12325P | |
| 12345 | AAA family ATPase | |||
| 23885 | IS3 family transposase | |||
| 23890 | R | PaeMF1ORF24740P (100% identity) | Pae1107ORF23910P | |
| 23895 | 235 aa hypothetical protein | |||
| 23900 | AAA family ATPase | |||
| 23905 | S | S.PaeMF1ORF24740P (100% identity) | S.Pae1107ORF23910P | |
| 23910 | M | M.PaeMF1ORF24740P (100% identity) | M.Pae1107ORF23910P | |
| 23915 | helix-turn-helix domain-containing protein | |||
| 31200 | endonuclease NucS | |||
| 31205 | S | S.PaesAG1ORF6375P (100% identity) | CACNNNNNNNRTGT | S.Pae1107ORF31210P |
| 31210 | M | M.PaesAG1ORF6375P (100% identity) | CACNNNNNNNRTGT | M.Pae1107ORF31210P |
| 31215 | HNH endonuclease signature motif containing | |||
| 31220 | R | PaesAG1ORF6375P (100% identity) | CACNNNNNNNRTGT | Pae1107ORF31210P |
| 31225 | peptidase M15 | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1630 | 94 aa hypothetical protein | |||
| 1635 | M | M.PaesS1ORF1335P (100% identity) | M.Pae1107ORF1635P | |
| 1640 | V | V.PaesS1ORF1335P (100% identity) | V.Pae1107ORF1635P | |
| 1645 | DISARM system phospholipase D-like protein DrmC | |||
| 1655 | DISARM system helicase DrmA | |||
| 1660 | RM | PaesS1ORF1360P (100% identity) | Pae1107ORF1660P | |
| 1665 | DISARM system SNF2-like helicase DrmD | |||
| 11725 | 213 aa hypothetical protein | |||
| 11730 | M | M.PaeYTSY4ORF6725P (100% identity) | M.Pae1107ORF11730P | |
| 11735 | 159 aa hypothetical protein | |||
| 26265 | nucleoid-associated protein YejK | |||
| 26270 | M | M.PaepUM505ORFAP (100% identity) | M.Pae1107ORF26270P | |
| 26275 | Arc family DNA-binding protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 12340 | HsdR family type I site-specific | |||
| 12345 | R | Pae973McrBP (100% identity) | Pae1107McrBP | |
| 12350 | R | Pae973McrCP (100% identity) | Pae1107McrCP | |
| 12355 | 166 aa hypothetical protein | |||