Salmonella enterica subsp. enterica serovar Enteritidis DSE06 |
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Putative Salmonella enterica subsp. enterica serovar Enteritidis DSE06 RM systems
Ref: Zhu,Y.L. and Gao,J. unpublished
REBASE ref # 36986
Complete sequence: 4,679,297 bp
GenBank #: CP126140
REBASE acronym: SenDSE06
Org_num: 68247
All begin QNM21_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19450 | NERD domain-containing protein/DEAD/DEAH box | |||
| 19455 | M | M.StySBLI (10% identity) | GGYANNNNNNTCG | M.SenDSE06ORF19455P |
| 19460 | S | S.StySBLI (100% identity) | GGYANNNNNNTCG | S.SenDSE06ORF19455P |
| 19465 | R | StySBLI (100% identity) | GGYANNNNNNTCG | SenDSE06ORF19455P |
| 19470 | endonuclease NucS | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2265 | DUF2556 family protein | |||
| 2270 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenDSE06ORF2270P |
| 2275 | DNA-binding transcriptional regulator Fis | |||
| 8915 | PerC family transcriptional regulator | |||
| 8920 | M | M.Ssp89ORF1824P (100% identity) | GATC | M.SenDSE06ORF8920P |
| 8925 | RusA family crossover junction | |||
| 13835 | drug/metabolite exporter YedA | |||
| 13840 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.SenDSE06DcmP |
| 13845 | M | M.SspZ69DcmP (100% identity) | CCWGG | M.SenDSE06DcmP |
| 13850 | phosphohydrolase | |||
| 19580 | YebC/PmpR family DNA-binding transcriptional | |||
| 19585 | R | SspSAL045ORF19515P (100% identity) | GAAC | SenDSE06ORF19585P |
| 19590 | IS3 family transposase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17375 | small effector SsaA | |||
| 17380 | R | SspSAL045ORF17295P (100% identity) | CAGAG | SenDSE06ORF17385P |
| 17385 | M | M.SspSAL045ORF17295P (100% identity) | CAGAG | M.SenDSE06ORF17385P |
| 17390 | MFS transporter | |||