Pseudomonas aeruginosa NY5532 |
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Putative Pseudomonas aeruginosa NY5532 RM systems
Ref: Zhou,D. unpublished
REBASE ref # 30477
Complete sequence: 6,883,424 bp
GenBank #: CP096950
REBASE acronym: Pae5532
Org_num: 68173
All begin M2I94_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 12405 | peptidase M15 | |||
| 12410 | R | PaeCF19ORF24245P (100% identity) | Pae5532ORF12420P | |
| 12415 | HNH endonuclease | |||
| 12420 | M | M.PaeCF19ORF24245P (100% identity) | M.Pae5532ORF12420P | |
| 12425 | S | S.PaeCF19ORF24245P (100% identity) | S.Pae5532ORF12420P | |
| 12430 | DUF262 domain-containing HNH endonuclease family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 195 | DGQHR domain-containing protein | |||
| 200 | M | M.Pae5524DndEP (100% identity) | M.Pae5532DndEP | |
| 205 | DNA sulfur modification protein DndD | |||
| 200 | DNA sulfur modification protein DndE | |||
| 205 | M | M.PaeLo564DndDP (100% identity) | M.Pae5532DndDP | |
| 210 | DNA phosphorothioation system sulfurtransferase | |||
| 205 | DNA sulfur modification protein DndD | |||
| 210 | M | M.PaeLo564DndCP (100% identity) | M.Pae5532DndCP | |
| 215 | DNA sulfur modification protein DndB | |||
| 210 | DNA phosphorothioation system sulfurtransferase | |||
| 215 | M | M.PaeLo564DndBP (98% identity) | M.Pae5532DndBP | |
| 220 | 133 aa hypothetical protein | |||
| 11635 | 57 aa hypothetical protein | |||
| 11640 | M | M.PaeR11ORF12365P (100% identity) | M.Pae5532ORF11640P | |
| 11645 | 108 aa hypothetical protein | |||
| 25385 | nucleoid-associated protein YejK | |||
| 25390 | M | M.PaeZM03ORFEP (99% identity) | M.Pae5532ORF25390P | |
| 25395 | Arc family DNA-binding protein | |||
| 25960 | nucleoid-associated protein YejK | |||
| 25965 | M | M.PspHORFAP (100% identity) | M.Pae5532ORF25965P | |
| 25970 | Arc family DNA-binding protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 23525 | ATP-dependent endonuclease | |||
| 23530 | R | PspP16ORFGP (100% identity) | Pae5532ORF23535P | |
| 23535 | M | M.PspP16ORFGP (100% identity) | M.Pae5532ORF23535P | |
| 23540 | DUF262 domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 12425 | restriction endonuclease subunit S | |||
| 12430 | R | PaeCF19GmrSD2P (100% identity) | Pae5532GmrSDP | |
| 12435 | anti-phage defense ZorAB system protein ZorA | |||
| 27110 | MarR family transcriptional regulator | |||
| 27115 | R | PaeSH15MrrP (100% identity) | Pae5532MrrP | |
| 27120 | type I restriction-modification system subunit | |||