Pseudomonas aeruginosa NY5520 |
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Putative Pseudomonas aeruginosa NY5520 RM systems
Ref: Zhou,D. unpublished
REBASE ref # 30477
| Sequence length: | GenBank #: | |
| Chromosome: | 6,582,575 bp | CP096937 |
| plasmid pNY5520-IMP: | 27,975 bp | CP096938 |
| plasmid pNY5520-NR: | 77,056 bp | CP096940 |
REBASE acronym: Pae5520
Org_num: 67584
All begin M2I89_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 25 | M48 family metallopeptidase | |||
| 30 | R | Pae92021ORF45P (100% identity) | Pae5520ORF45P | |
| 35 | 139 aa hypothetical protein | |||
| 40 | S | S.Pae92021ORF45P (100% identity) | S.Pae5520ORF45P | |
| 45 | M | M.Pae92021ORF45P (100% identity) | M.Pae5520ORF45P | |
| 50 | N-6 DNA methylase | |||
| 23780 | VWA domain-containing protein | |||
| 23785 | R | PaesC79ORF30460P (100% identity) | Pae5520ORF23800P | |
| 23790 | S | S3.PaesC79ORF30460P (100% identity) | S2.Pae5520ORF23800P | |
| 23795 | S | S1.Pae70ORF23825P (100% identity) | S1.Pae5520ORF23800P | |
| 23800 | M | M.PaesC79ORF30460P (100% identity) | M.Pae5520ORF23800P | |
| 23805 | DUF262 domain-containing HNH endonuclease family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12890 | DEAD/DEAH box helicase | |||
| 12895 | RM | Pae5535ORF12875P (100% identity) | Pae5520ORF12895P | |
| 12900 | tyrosine-type recombinase/integrase | |||
| 23195 | phage late control D family protein | |||
| 23200 | M | M.PaeLo504ORF27465P (69% identity) | M.Pae5520ORF23200P | |
| 23205 | 116 aa hypothetical protein | |||
| 23270 | 58 aa hypothetical protein | |||
| 23275 | M | M.Pae92ORF25970P (100% identity) | M.Pae5520ORF23275P | |
| 23280 | 60 aa hypothetical protein | |||
| plasmid pNY5520-IMP | ||||
| 30995 | 58 aa hypothetical protein | |||
| 31000 | R | Pae92021ORF31465P (100% identity) | Pae5520ORF31005P | |
| 31005 | M | M.Pae92021ORF31465P (100% identity) | M.Pae5520ORF31005P | |
| 31010 | 70 aa hypothetical protein | |||
| plasmid pNY5520-NR | ||||
| 31310 | 54 aa hypothetical protein | |||
| 31315 | M | M.Pae5520ORF31780P (100% identity) | M.Pae5520ORF31315P | |
| 31320 | 3-5 exonuclease | |||
| 31775 | 3-5 exonuclease | |||
| 31780 | M | M.Pae5520ORF31315P (100% identity) | M.Pae5520ORF31780P | |
| 31785 | 54 aa hypothetical protein | |||