Citrobacter freundii 26019 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Citrobacter freundii 26019 RM systems
Ref: Zhang,F. and Lu,B. unpublished
REBASE ref # 36766
| Sequence length: | GenBank #: | |
| Chromosome: | 5,177,371 bp | CP119048 |
| plasmid p26019-1: | 130,724 bp | CP119049 |
| plasmid p26019-2: | 229,097 bp | CP119050 |
| plasmid p26019-3: | 35,420 bp | CP119051 |
REBASE acronym: Cfr26019
Org_num: 67200
All begin PXV98_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10040 | CDP-diacylglycerol--glycerol-3-phosphate | |||
| 10060 | M | M.CfrUKJ86ORF15655P (100% identity) | ACAGNNNNNCCT | M.Cfr26019ORF10060P |
| 10065 | S | S.CfrUKJ86ORF15655P (100% identity) | ACAGNNNNNCCT | S1.Cfr26019ORF10060P |
| 10070 | R | CfrUKJ86ORF15655P (100% identity) | ACAGNNNNNCCT | Cfr26019ORF10060P |
| 10075 | SprT family zinc-dependent metalloprotease | |||
| 21760 | restriction endonuclease | |||
| 21765 | R | CfrMH16IIIP (100% identity) | CACNNNNNNNTGCC | Cfr26019ORF21770P |
| 21770 | M | M.CfrMH16III (100% identity) | CACNNNNNNNTGCC | M.Cfr26019ORF21770P |
| 21775 | S | S.CfrMH16III (100% identity) | CACNNNNNNNTGCC | S.Cfr26019ORF21770P |
| 21780 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1615 | cell division protein DamX | |||
| 1620 | M | M.Eco5172DamP (100% identity) | GATC | M.Cfr26019DamP |
| 1625 | ribulose-phosphate 3-epimerase | |||
| 2160 | DUF2556 family protein | |||
| 2165 | M | M.CspLUTT5ORF2195P (100% identity) | ATGCAT | M.Cfr26019ORF2165P |
| 2170 | DNA-binding transcriptional regulator Fis | |||
| 6575 | recombination protein NinG | |||
| 6580 | M | M.Cpo163ORF12950P (100% identity) | M.Cfr26019ORF6580P | |
| 6585 | antiterminator Q family protein | |||
| 8975 | 129 aa hypothetical protein | |||
| 8980 | M | M.CfrF2021ORF8940P (100% identity) | M.Cfr26019ORF8980P | |
| 8985 | replication endonuclease | |||
| 9820 | phosphohydrolase | |||
| 9825 | M | M.CfrF2021ORF9775P (100% identity) | CCWGG | M.Cfr26019ORF9825P |
| 9830 | V | V.CfrF2021ORF9775P (100% identity) | V.Cfr26019ORF9825P | |
| 9835 | drug/metabolite exporter YedA | |||
| 10550 | 100 aa hypothetical protein | |||
| 10555 | M | M.CfrF2021ORF10505P (100% identity) | M.Cfr26019ORF10555P | |
| 10560 | 242 aa hypothetical protein | |||
| 11725 | 85 aa hypothetical protein | |||
| 11730 | M | M.Cfr942ORF11365P (99% identity) | M.Cfr26019ORF11730P | |
| 11735 | DinI family protein | |||
| 16825 | replication endonuclease | |||
| 16830 | M | M.CfrF2021ORF16320P (100% identity) | M.Cfr26019ORF16830P | |
| 16835 | TraR/DksA family transcriptional regulator | |||
| 21935 | HNH endonuclease | |||
| 21940 | R | CfrF2021ORF21355P (100% identity) | Cfr26019ORF21940P | |
| 21945 | DUF4942 domain-containing protein | |||
| plasmid p26019-1 | ||||
| 25220 | SOS response-associated peptidase family | |||
| 25225 | M | M.YpeZORF72P (100% identity) | M.Cfr26019ORF25225P | |
| 25230 | 73 aa hypothetical protein | |||
| plasmid p26019-2 | ||||
| 26330 | DNA polymerase III subunit beta | |||
| 26335 | M | M.Sen3039ORF24445P (100% identity) | GATC | M.Cfr26019ORF26335P |
| 26340 | 76 aa hypothetical protein | |||
| plasmid p26019-3 | ||||
| 27505 | 190 aa hypothetical protein | |||
| 27510 | R | Sma31ORF25925P (100% identity) | Cfr26019ORF27510P | |
| 27515 | 82 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21755 | GTPase | |||
| 21760 | R | CfrF2021MrrP (100% identity) | Cfr26019MrrP | |
| 21765 | type I restriction-modification system | |||