Vibrio fluvialis IDH05335 |
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Putative Vibrio fluvialis IDH05335 RM systems
Ref: Chowdhurry,G. et al. unpublished
REBASE ref # 36874
| Sequence length: | GenBank #: | |
| chromosome 1: | 3,364,569 bp | AP028128 |
| plasmid pIDH5335-1: | 370,014 bp | AP028130 |
| plasmid pIDH5335-2: | 103,088 bp | AP028131 |
REBASE acronym: Vfl5335
Org_num: 67733
All begin KKIDH5335_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 1110 | helix-turn-helix domain-containing protein | |||
| 1120 | R | Vsp1111ORF14985P (100% identity) | Vfl5335ORF1130P | |
| 1130 | M | M.VvuYORF266P (97% identity) | M.Vfl5335ORF1130P | |
| 1140 | S | S.Vfl942ORF10P (100% identity) | S.Vfl5335ORF1130P | |
| 1150 | 265 aa hypothetical protein | |||
| 4000 | 331 aa hypothetical protein | |||
| 4010 | S | S.Vvu077ORF2496P (100% identity) | S.Vfl5335ORF4020P | |
| 4020 | M | M.VaeU29ORF17790P (99% identity) | M.Vfl5335ORF4020P | |
| 4030 | 441 aa hypothetical protein | |||
| 4040 | 428 aa hypothetical protein | |||
| 4050 | R | VpaS1ORFAP (98% identity) | Vfl5335ORF4020P | |
| 4060 | MarR family transcriptional regulator | |||
| 28970 | DUF4276 family protein | |||
| 28980 | R | VspJ502ORF10755P (98% identity) | Vfl5335ORF29000P | |
| 28990 | 511 aa hypothetical protein | |||
| 29000 | M | M.PspD4759ORF17390P (93% identity) | M.Vfl5335ORF29000P | |
| 29010 | S | S.Ero1430ORF15095P (61% identity) | S.Vfl5335ORF29000P | |
| 29020 | 380 aa hypothetical protein | |||
| plasmid pIDH5335-1 | ||||
| 47860 | 162 aa hypothetical protein | |||
| 47870 | R | Sco8285ORF7730P (95% identity) | Vfl5335ORF47890P | |
| 47880 | 596 aa hypothetical protein | |||
| 47890 | M | M.PspD4759ORF17390P (96% identity) | M.Vfl5335ORF47890P | |
| 47900 | S | S.VtuFP17ORF15190P (60% identity) | S.Vfl5335ORF47890P | |
| 47910 | 459 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 27470 | ribulose-phosphate 3-epimerase | |||
| 27480 | M | M.VspLQ2DamP (100% identity) | GATC | M.Vfl5335DamP |
| 27490 | ExeA family protein | |||
| plasmid pIDH5335-2 | ||||
| 49060 | 85 aa hypothetical protein | |||
| 49070 | M | M.YrupYR1ORFCP (48% identity) | M.Vfl5335ORF49070P | |
| 49080 | 144 aa hypothetical protein | |||
| 49310 | 268 aa hypothetical protein | |||
| 49320 | M | M.Vca29ORF28840P (90% identity) | M.Vfl5335ORF49320P | |
| 49330 | 124 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 24510 | 96 aa hypothetical protein | |||
| 24520 | R | SpuJNE2ORF15250P (100% identity) | CAGAAC | Vfl5335ORF24530P |
| 24530 | M | M.SpuJNE2ORF15250P (100% identity) | CAGAAC | M.Vfl5335ORF24530P |
| 24540 | YafY family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 4070 | AlpA family phage regulatory protein | |||
| 4080 | R | VpaBM8AMrrP (98% identity) | Vfl5335MrrP | |
| 4090 | heme d1 biosynthesis radical SAM | |||