Vibrio parahaemolyticus PH1339 |
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Putative Vibrio parahaemolyticus PH1339 RM systems
Ref: Santos,M.N. et al. unpublished
REBASE ref # 36878
| Sequence length: | GenBank #: | |
| chromosome 1: | 3,438,302 bp | CP114183 |
| plasmid unnamed: | 69,091 bp | CP114185 |
REBASE acronym: Vpa1339
Org_num: 67739
All begin O1N17_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 13070 | AAA family ATPase | |||
| 13075 | R | Vph2S01ORF2502P (100% identity) | Vpa1339ORF13085P | |
| 13080 | S | S.Vph2S01ORF2502P (100% identity) | S.Vpa1339ORF13085P | |
| 13085 | M | M2.Vph2S01ORF2502P (100% identity) | M2.Vpa1339ORF13085P | |
| 13090 | M | M1.Vph2S01ORF2502P (100% identity) | M1.Vpa1339ORF13085P | |
| 13095 | helix-turn-helix domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 14420 | 396 aa hypothetical protein | |||
| 14425 | M | M.Vpa0081ORF675P (98% identity) | M.Vpa1339ORF14425P | |
| 14430 | 499 aa hypothetical protein | |||
| 16400 | DUF262 domain-containing protein | |||
| 16405 | M | M.VcaC015SspDP (100% identity) | M.Vpa1339SspDP | |
| 16410 | M | M.VcaC015SspCP (94% identity) | M.Vpa1339SspCP | |
| 16415 | M | M.VcaC015SspBP (93% identity) | M.Vpa1339SspBP | |
| 16420 | M | M.Vat7223SspAP (77% identity) | M.Vpa1339SspAP | |
| 16425 | DNA phosphorothioation-associated putative | |||
| plasmid unnamed | ||||
| 25410 | integrase | |||
| 25415 | M | M.VpaVP17ORF25320P (100% identity) | M.Vpa1339ORF25415P | |
| 25420 | IS5-like element ISVa2 family transposase | |||