Spiroplasma species SV19 |
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Putative Spiroplasma species SV19 RM systems
Ref: Vangkilde-Pedersen,S.G. and Lund,M.B. unpublished
REBASE ref # 36859
Complete sequence: 1,456,516 bp
GenBank #: CP045455
REBASE acronym: SspSV19
Org_num: 67637
All begin E7Y35_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6570 | 206 aa hypothetical protein | |||
| 6575 | R | Sme576ORF2632P (42% identity) | SspSV19ORF6580P | |
| 6580 | M | M.Sme576ORF2632P (71% identity) | M.SspSV19ORF6580P | |
| ??? | S | S2.MsyYJSORF1325P (14% identity) | S1.SspSV19ORF6580P | |
| 6585 | 170 aa hypothetical protein | |||
| 6590 | 92 aa hypothetical protein | |||
| 6595 | tyrosine-type recombinase/integrase | |||
| 6600 | S | S3.UurWJSLORF165P (17% identity) | S2.SspSV19ORF6580P | |
| 6605 | 64 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 300 | 260 aa hypothetical protein | |||
| 305 | M | M.SspSV19ORF4230P (97% identity) | M1.SspSV19ORF305P | |
| 310 | sugar-phosphate nucleotidyltransferase | |||
| 315 | M | M1.SchDF1ORF9340P (73% identity) | M2.SspSV19ORF305P | |
| 320 | 152 aa hypothetical protein | |||
| 350 | TraM recognition domain-containing protein | |||
| 355 | M | M.PwiZORF3410P (65% identity) | M.SspSV19ORF355P | |
| 360 | 188 aa hypothetical protein | |||
| 4225 | sugar-phosphate nucleotidyltransferase | |||
| 4230 | M | M1.SspSV19ORF305P (97% identity) | M.SspSV19ORF4230P | |
| 4235 | 251 aa hypothetical protein | |||
| 4795 | 146 aa hypothetical protein | |||
| 4800 | M | M.Hpy444A6ORFOP (52% identity) | M.SspSV19ORF4800P | |
| 4805 | R | Sme576ORF2277P (49% identity) | SspSV19ORF4800P | |
| 4810 | 572 aa hypothetical protein | |||
| 5925 | DUF1524 domain-containing protein | |||
| 5930 | M | M.SsyEA1ORF7090P (65% identity) | M.SspSV19ORF5930P | |
| 5935 | 153 aa hypothetical protein | |||
| 6685 | helix-turn-helix domain-containing protein | |||
| 6690 | M | M1.FnuSB058ORF1520P (52% identity) | M1.SspSV19ORF6690P | |
| 6695 | M | M2.FnuSB058ORF1520P (46% identity) | M2.SspSV19ORF6690P | |
| 6700 | R | Lsh16776ORF373P (29% identity) | R1.SspSV19ORF6690P | |
| 6705 | R | Lme3356ORF10045P (9% identity) | R2.SspSV19ORF6690P | |
| 6710 | AAA family ATPase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 775 | 82 aa hypothetical protein | |||
| 780 | R | Aho11636ORF1601P (13% identity) | SspSV19ORF780P | |
| 785 | 458 aa hypothetical protein | |||