Citrobacter freundii CF5125 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Citrobacter freundii CF5125 RM systems
Ref: Sun,M. et al. unpublished
REBASE ref # 36751
| Sequence length: | GenBank #: | |
| Chromosome: | 5,249,982 bp | CP125310 |
| plasmid pCF5125-1: | 111,042 bp | CP125311 |
| plasmid pCF5125-2: | 88,087 bp | CP125312 |
| plasmid pCF5125-3: | 76,037 bp | CP125313 |
| plasmid pCF5125-4: | 71,751 bp | CP125314 |
REBASE acronym: Cfr5125
Org_num: 67165
All begin QKW62_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3365 | restriction endonuclease | |||
| 3370 | R | CfrGORF20560P (79% identity) | Cfr5125ORF3380P | |
| 3375 | type I restriction-modification enzyme R subunit | |||
| 3380 | M | M.CfrGORF20560P (100% identity) | M.Cfr5125ORF3380P | |
| 3385 | S | S.CfrGORF20560P (100% identity) | S.Cfr5125ORF3380P | |
| 3390 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3560 | DUF1493 family protein | |||
| 3565 | R | CfrGORF20750P (100% identity) | Cfr5125ORF3565P | |
| 3570 | primase-like DNA-binding domain-containing | |||
| 5155 | 56 aa hypothetical protein | |||
| 5160 | M | M.SmaQC11ORF52800P (100% identity) | M.Cfr5125ORF5160P | |
| 5165 | 73 aa hypothetical protein | |||
| 10170 | 264 aa hypothetical protein | |||
| 10175 | M | M.CfrGORF14110P (100% identity) | M.Cfr5125ORF10175P | |
| 10195 | 40 aa hypothetical protein | |||
| 13820 | DinI family protein | |||
| 13825 | M | M.CpoF36ORF11040P (100% identity) | M.Cfr5125ORF13825P | |
| 13830 | 85 aa hypothetical protein | |||
| 15150 | DinI family protein | |||
| 15155 | M | M.Cfr680ORF17960P (96% identity) | M.Cfr5125ORF15155P | |
| 15160 | 85 aa hypothetical protein | |||
| 15165 | DUF550 domain-containing protein | |||
| 15170 | M | M.Csp2AORF13720P (97% identity) | M.Cfr5125ORF15170P | |
| 15175 | 100 aa hypothetical protein | |||
| 15590 | RusA family crossover junction | |||
| 15595 | M | M.CfrB38ORF1059P (100% identity) | M1.Cfr5125ORF15595P | |
| 15600 | M | M.CfrB38ORF1058P (99% identity) | M2.Cfr5125ORF15595P | |
| 15605 | conserved phage C-terminal domain-containing | |||
| 15655 | 114 aa hypothetical protein | |||
| 15660 | M | M.Csp944ORF10665P (100% identity) | M.Cfr5125ORF15660P | |
| 15665 | 180 aa hypothetical protein | |||
| 16155 | drug/metabolite exporter YedA | |||
| 16160 | V | V.CfrL75DcmP (100% identity) | V.Cfr5125DcmP | |
| 16165 | M | M.CfrHM38III (100% identity) | CCWGG | M.Cfr5125DcmP |
| 16170 | phosphohydrolase | |||
| 19480 | 73 aa hypothetical protein | |||
| 19485 | M | M.SmaQC11ORF52800P (100% identity) | M.Cfr5125ORF19485P | |
| 19490 | 56 aa hypothetical protein | |||
| 19835 | 73 aa hypothetical protein | |||
| 19840 | M | M.SmaQC11ORF52800P (100% identity) | M.Cfr5125ORF19840P | |
| 19845 | 56 aa hypothetical protein | |||
| 23595 | DNA-binding transcriptional regulator Fis | |||
| 23600 | M | M.CspLUTT5ORF2195P (100% identity) | ATGCAT | M.Cfr5125ORF23600P |
| 23605 | DUF2556 family protein | |||
| plasmid pCF5125-1 | ||||
| 26640 | 76 aa hypothetical protein | |||
| 26645 | M | M.CfrGORF25495P (100% identity) | M.Cfr5125ORF26645P | |
| 26650 | 280 aa hypothetical protein | |||
| plasmid pCF5125-2 | ||||
| 27125 | recombination-associated protein RdgC | |||
| 27130 | M | M.CfrBL77ORF1925P (100% identity) | M.Cfr5125ORF27130P | |
| 27135 | stability/ partitioning determinant | |||
| plasmid pCF5125-3 | ||||
| 27255 | SOS response-associated peptidase family | |||
| 27260 | M | M.Kpnx197ORFAP (100% identity) | M.Cfr5125ORF27260P | |
| 27265 | 74 aa hypothetical protein | |||
| plasmid pCF5125-4 | ||||
| 27840 | 73 aa hypothetical protein | |||
| 27845 | M | M.Xca80ORFEP (100% identity) | M.Cfr5125ORF27845P | |
| 27850 | 97 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3360 | GTPase | |||
| 3365 | R | Cfr369MrrP (100% identity) | Cfr5125MrrP | |
| 3370 | type I restriction-modification system | |||