Escherichia coli KFS-D08 |
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Putative Escherichia coli KFS-D08 RM systems
Ref: Gomi,R. et al. unpublished
REBASE ref # 36781
| Sequence length: | GenBank #: | |
| Chromosome: | 4,657,779 bp | CP125033 |
| plasmid pKFS-D08_1: | 174,470 bp | CP125035 |
| plasmid pKFS-D08_2: | 92,135 bp | CP125036 |
| plasmid pKFS-D08_3: | 70,669 bp | CP125034 |
REBASE acronym: EcoD08
Org_num: 67399
All begin QL137_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 15840 | DUF4942 domain-containing protein | |||
| 15845 | M | M.SflN110ORF19045P (100% identity) | CCANNNNNNNNTGAA | M.EcoD08ORF15845P |
| 15850 | S | S.SflN110ORF19045P (100% identity) | CCANNNNNNNNTGAA | S.EcoD08ORF15845P |
| 15855 | R | SflN110ORF19045P (100% identity) | CCANNNNNNNNTGAA | EcoD08ORF15845P |
| 15860 | 50 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5425 | phosphohydrolase | |||
| 5430 | M | M.SflN92DcmP (100% identity) | CCWGG | M.EcoD08DcmP |
| 5435 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcoD08DcmP |
| 5440 | drug/metabolite exporter YedA | |||
| 7435 | DUF977 family protein | |||
| 7440 | M | M.SsoSE61ORF20220P (100% identity) | M.EcoD08ORF7440P | |
| 7445 | IS66-like element ISEc22 family transposase | |||
| 13880 | HEPN domain-containing protein | |||
| 13885 | R | Ecos67ORF8885P (100% identity) | EcoD08ORF13890P | |
| 13890 | M | M.Ecos67ORF8885P (100% identity) | M.EcoD08ORF13890P | |
| 13895 | 59 aa hypothetical protein | |||
| 15820 | HNH endonuclease | |||
| 15825 | R | SflSTLE4ORF19250P (100% identity) | EcoD08ORF15825P | |
| 15830 | McrC family protein | |||
| 16210 | sigma 54-interacting transcriptional regulator | |||
| 16215 | R | Ecop10BORF20145P (100% identity) | EcoD08ORF16215P | |
| 16220 | IS21-like element IS100 family transposase | |||
| 20815 | cell division protein DamX | |||
| 20820 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoD08DamP |
| 20825 | ribulose-phosphate 3-epimerase | |||
| plasmid pKFS-D08_1 | ||||
| 24015 | 103 aa hypothetical protein | |||
| 24020 | M | M.KpnVA569ORF28145P (100% identity) | M.EcoD08ORF24020P | |
| 24025 | 73 aa hypothetical protein | |||
| plasmid pKFS-D08_2 | ||||
| 24295 | glutamine--tRNA ligase | |||
| ??? | M | M.EcoT167ORFBP (100% identity) | M.EcoD08ORF24300P | |
| 24305 | 216 aa hypothetical protein | |||
| plasmid pKFS-D08_3 | ||||
| 22960 | 103 aa hypothetical protein | |||
| 22965 | M | M.Ecos69ORF26765P (100% identity) | M.EcoD08ORF22965P | |
| 22970 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 15825 | HNH endonuclease | |||
| 15830 | R | SflSTLE4McrCP (100% identity) | EcoD08McrCP | |
| 15835 | R | SflSTLE4McrBP (100% identity) | EcoD08McrBP | |
| 15840 | DUF4942 domain-containing protein | |||