Escherichia coli ETEC1734 |
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Putative Escherichia coli ETEC1734 RM systems
Ref: Vereecke,N. et al. Front Microbiol 14, 1139312 (2023)
REBASE ref # 36777
| Sequence length: | GenBank #: | |
| Chromosome: | 5,272,521 bp | CP122801 |
| plasmid unnamed3: | 79,114 bp | CP122804 |
| plasmid unnamed4: | 79,263 bp | CP122805 |
| plasmid unnamed6: | 98,226 bp | CP122807 |
| plasmid unnamed8: | 90,361 bp | CP122809 |
REBASE acronym: EcoC1734
Org_num: 67349
All begin QDX84_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5730 | GTPase family protein | |||
| 5735 | M | M.EcoEC521ORF29600P (100% identity) | M.EcoC1734ORF5735P | |
| 5740 | S | S.EcoC1745ORF3890P (100% identity) | S.EcoC1734ORF5735P | |
| 5745 | R | EcoEC521ORF29600P (100% identity) | EcoC1734ORF5735P | |
| 5750 | 122 aa hypothetical protein | |||
| 22735 | DUF262 domain-containing HNH endonuclease family | |||
| 22740 | R | EcoXH993ORF23720P (100% identity) | EcoC1734ORF22745P | |
| 22745 | M | M.EcoUM1887ORF20145P (100% identity) | M.EcoC1734ORF22745P | |
| 22750 | S | S.EcoC1745ORF22540P (100% identity) | S.EcoC1734ORF22745P | |
| 22755 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1820 | cell division protein DamX | |||
| 1825 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoC1734DamP |
| 1830 | ribulose-phosphate 3-epimerase | |||
| 2445 | DUF2556 family protein | |||
| 2450 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoC1734ORF2450P |
| 2455 | DNA-binding transcriptional regulator Fis | |||
| 6065 | TrmB family transcriptional regulator | |||
| 6070 | M | M.EcoC1744ORF6450P (100% identity) | M.EcoC1734ORF6070P | |
| 6080 | 132 aa hypothetical protein | |||
| 8970 | 257 aa hypothetical protein | |||
| 8975 | R | EcoC1732ORF8970P (100% identity) | EcoC1734ORF8975P | |
| 8980 | transcription factor | |||
| 10160 | phosphohydrolase | |||
| 10165 | M | M.SspS13DcmP (100% identity) | CCWGG | M.EcoC1734DcmP |
| 10170 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcoC1734DcmP |
| 10175 | drug/metabolite exporter YedA | |||
| 10985 | TrmB family transcriptional regulator | |||
| 10990 | M | M.EcoR71ORF17805P (100% identity) | M.EcoC1734ORF10990P | |
| 11005 | tellurite/colicin resistance protein | |||
| 12770 | DUF977 family protein | |||
| 12775 | M | M.SsoSE61ORF20220P (100% identity) | M.EcoC1734ORF12775P | |
| 12780 | 60 aa hypothetical protein | |||
| 15020 | tellurite/colicin resistance protein | |||
| 15035 | M | M.EcoC1732ORF15035P (100% identity) | M.EcoC1734ORF15035P | |
| 15040 | TrmB family transcriptional regulator | |||
| 18070 | NinE family protein | |||
| 18075 | M | M.SflFF36ORF6645P (100% identity) | GATC | M.EcoC1734ORF18075P |
| 18080 | recombination protein NinB | |||
| 20855 | RusA family crossover junction | |||
| 20860 | M | M.EcoECO21ORF17780P (100% identity) | GATC | M.EcoC1734ORF20860P |
| 20865 | PerC family transcriptional regulator | |||
| plasmid unnamed3 | ||||
| 26580 | 103 aa hypothetical protein | |||
| 26585 | M | M.StyR64ORFAP (100% identity) | M.EcoC1734ORF26585P | |
| 26590 | 73 aa hypothetical protein | |||
| plasmid unnamed4 | ||||
| 27270 | 97 aa hypothetical protein | |||
| 27275 | M | M.EcoPK8217ORF24325P (100% identity) | M.EcoC1734ORF27275P | |
| 27280 | 73 aa hypothetical protein | |||
| plasmid unnamed6 | ||||
| 27610 | 103 aa hypothetical protein | |||
| 27615 | M | M.Ecocq9ORF29710P (100% identity) | M.EcoC1734ORF27615P | |
| 27620 | 73 aa hypothetical protein | |||
| plasmid unnamed8 | ||||
| 28445 | glutamine--tRNA ligase | |||
| ??? | M | M.EcoM1586ORF26310P (100% identity) | M.EcoC1734ORF28450P | |
| 28455 | 206 aa hypothetical protein | |||