Escherichia coli ETEC4065 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli ETEC4065 RM systems
Ref: Vereecke,N. et al. Front Microbiol 14, 1139312 (2023)
REBASE ref # 36777
| Sequence length: | GenBank #: | |
| Chromosome: | 4,856,688 bp | CP122690 |
| plasmid unnamed1: | 85,199 bp | CP122691 |
| plasmid unnamed2: | 86,912 bp | CP122692 |
REBASE acronym: Eco4065
Org_num: 67364
All begin QDW54_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1835 | cell division protein DamX | |||
| 1840 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco4065DamP |
| 1845 | ribulose-phosphate 3-epimerase | |||
| 2475 | DUF2556 family protein | |||
| 2480 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco4065ORF2480P |
| 2485 | DNA-binding transcriptional regulator Fis | |||
| 9235 | phosphohydrolase | |||
| 9240 | M | M.SflFF59DcmP (100% identity) | CCWGG | M.Eco4065DcmP |
| 9245 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.Eco4065DcmP |
| 9250 | drug/metabolite exporter YedA | |||
| 15325 | tellurite/colicin resistance protein | |||
| 15340 | M | M.EcoFec101ORF18670P (99% identity) | M.Eco4065ORF15340P | |
| 15345 | TrmB family transcriptional regulator | |||
| 18940 | BREX-1 system phosphatase PglZ type A | |||
| 18945 | RM | EcosW25KORF12230P (99% identity) | Eco4065ORF18945P | |
| 18950 | BREX system P-loop protein BrxC | |||
| 18980 | zinc ribbon domain-containing protein | |||
| 18985 | M | M.KpnFF77ORF20840P (100% identity) | GGTACC | M.Eco4065ORF18985P |
| 18990 | tyrosine-type recombinase/integrase | |||
| plasmid unnamed1 | ||||
| 24120 | 73 aa hypothetical protein | |||
| 24125 | M | M.SdyFF51ORF24515P (100% identity) | M.Eco4065ORF24125P | |
| 24130 | 101 aa hypothetical protein | |||
| plasmid unnamed2 | ||||
| 24915 | 97 aa hypothetical protein | |||
| 24920 | M | M.Sen527ORF25750P (100% identity) | M.Eco4065ORF24920P | |
| 24925 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 345 | zinc ribbon protein | |||
| 350 | R | Kpn0718McrBP (100% identity) | Eco4065McrBP | |
| 355 | R | SflN97McrCP (100% identity) | Eco4065McrCP | |
| 360 | IS3-like element ISSen4 family transposase | |||
| 20770 | IS1-like element IS1A family transposase | |||
| 20775 | R | SflLIN8GmrSDP (42% identity) | Eco4065GmrSP | |
| 20780 | cytoplasmic protein | |||