Escherichia coli ETEC6335 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli ETEC6335 RM systems
Ref: Vereecke,N. et al. Front Microbiol 14, 1139312 (2023)
REBASE ref # 36777
| Sequence length: | GenBank #: | |
| Chromosome: | 5,120,416 bp | CP122588 |
| plasmid unnamed1: | 136,050 bp | CP122589 |
| plasmid unnamed4: | 120,805 bp | CP122592 |
| plasmid unnamed5: | 95,838 bp | CP122593 |
| plasmid unnamed9: | 92,714 bp | CP122597 |
REBASE acronym: EcoC6335
Org_num: 67384
All begin QDY30_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21550 | restriction endonuclease | |||
| 21555 | M | M.EcoL26ORF21190P (100% identity) | GTCANNNNNCTC | M.EcoC6335ORF21555P |
| 21560 | S | S.EcoA16I (100% identity) | GTCANNNNNCTC | S.EcoC6335ORF21555P |
| 21565 | R | EcoA16IP (100% identity) | GTCANNNNNCTC | EcoC6335ORF21555P |
| 21570 | endoribonuclease SymE | |||
| plasmid unnamed9 | ||||
| 27845 | type II toxin-antitoxin system Phd/YefM family | |||
| 27850 | M | M.EcoEA13ORF24000P (100% identity) | M.EcoC6335ORF27850P | |
| 27855 | S | S.Eco33CCORF50320P (100% identity) | S.EcoC6335ORF27850P | |
| 27860 | R | EfeC18ORF22895P (100% identity) | EcoC6335ORF27850P | |
| 27865 | 3-phosphatase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1940 | cell division protein DamX | |||
| 1945 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoC6335DamP |
| 1950 | ribulose-phosphate 3-epimerase | |||
| 2455 | DUF2556 family protein | |||
| 2460 | M | M.SflWW1ORF2205P (100% identity) | ATGCAT | M.EcoC6335ORF2460P |
| 2465 | DNA-binding transcriptional regulator Fis | |||
| 9685 | phosphohydrolase | |||
| 9690 | M | M.SdySWHE2DcmP (100% identity) | CCWGG | M.EcoC6335DcmP |
| 9695 | V | V.EcoR42DcmP (100% identity) | V.EcoC6335DcmP | |
| 9700 | drug/metabolite exporter YedA | |||
| 11705 | DUF977 family protein | |||
| 11710 | M | M.EcosC41ORF15185P (100% identity) | M.EcoC6335ORF11710P | |
| 11715 | 139 aa hypothetical protein | |||
| 16120 | replication endonuclease | |||
| 16125 | M | M.Eco13F7ORF230P (98% identity) | GATC | M.EcoC6335ORF16125P |
| 16130 | TraR/DksA family transcriptional regulator | |||
| 20290 | Shiga toxin Stx2e subunit A | |||
| 20310 | M | M.EcoC1730ORF14040P (99% identity) | M.EcoC6335ORF20310P | |
| 20315 | TrmB family transcriptional regulator | |||
| plasmid unnamed1 | ||||
| 25545 | 103 aa hypothetical protein | |||
| 25550 | M | M.SenSL0048ORF23875P (100% identity) | M.EcoC6335ORF25550P | |
| 25555 | 73 aa hypothetical protein | |||
| plasmid unnamed4 | ||||
| 25740 | 103 aa hypothetical protein | |||
| 25745 | M | M.Ecocq9ORF29710P (100% identity) | M.EcoC6335ORF25745P | |
| 25750 | 73 aa hypothetical protein | |||
| plasmid unnamed5 | ||||
| 26775 | glutamine--tRNA ligase | |||
| ??? | M | M.SenThORF23620P (100% identity) | M.EcoC6335ORF26780P | |
| 26785 | 216 aa hypothetical protein | |||
| plasmid unnamed9 | ||||
| 27955 | TerB family tellurite resistance protein | |||
| 27970 | M | M.EcoDEC12BORF3631P (99% identity) | M.EcoC6335ORF27970P | |
| 27975 | recombination-associated protein RdgC | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21545 | BrnT family toxin | |||
| 21550 | R | EcoA16MrrP (100% identity) | EcoC6335MrrP | |
| 21555 | class I SAM-dependent DNA methyltransferase | |||