Escherichia coli ETEC1720 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli ETEC1720 RM systems
Ref: Vereecke,N. et al. Front Microbiol 14, 1139312 (2023)
REBASE ref # 36777
| Sequence length: | GenBank #: | |
| Chromosome: | 4,697,733 bp | CP122859 |
| plasmid unnamed5: | 100,169 bp | CP122864 |
| plasmid unnamed7: | 105,313 bp | CP122866 |
| plasmid unnamed8: | 107,570 bp | CP122867 |
REBASE acronym: EcoC1720
Org_num: 67340
All begin QDY31_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3315 | transposase domain-containing protein | |||
| 3320 | M | M.EcoC1739ORF3335P (100% identity) | AGGNNNNNRTTG | M.EcoC1720ORF3320P |
| 3325 | AAA family ATPase | |||
| 3330 | S | S2.SenSI170ORF3660P (100% identity) | AGGNNNNNRTTG | S.EcoC1720ORF3320P |
| 3335 | R | SenSI170ORF3660P (100% identity) | AGGNNNNNRTTG | EcoC1720ORF3320P |
| 3340 | IS3 family transposase | |||
| plasmid unnamed5 | ||||
| 24260 | type II toxin-antitoxin system Phd/YefM family | |||
| 24265 | M | M.EcoC1722ORF24070P (100% identity) | M.EcoC1720ORF24265P | |
| 24270 | S | S.EcoC1722ORF24070P (100% identity) | S.EcoC1720ORF24265P | |
| 24275 | R | EcoC1722ORF24070P (100% identity) | EcoC1720ORF24265P | |
| 24280 | 3-phosphatase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1610 | cell division protein DamX | |||
| 1615 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoC1720DamP |
| 1620 | ribulose-phosphate 3-epimerase | |||
| 2235 | DUF2556 family protein | |||
| 2240 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcoC1720ORF2240P |
| 2245 | DNA-binding transcriptional regulator Fis | |||
| 9125 | HD domain-containing protein | |||
| 9130 | M | M.SflSTLE3DcmP (100% identity) | CCWGG | M.EcoC1720DcmP |
| 9135 | V | V.SflSTLE3DcmP (100% identity) | CCWGG | V.EcoC1720DcmP |
| 9140 | drug/metabolite exporter YedA | |||
| 11295 | DUF977 family protein | |||
| 11300 | M | M.SsoSE61ORF20220P (100% identity) | M.EcoC1720ORF11300P | |
| 11305 | 139 aa hypothetical protein | |||
| plasmid unnamed5 | ||||
| 24375 | tellurite/colicin resistance protein | |||
| 24390 | M | M.EcoC1722ORF24200P (100% identity) | M.EcoC1720ORF24390P | |
| 24395 | recombination-associated protein RdgC | |||
| plasmid unnamed7 | ||||
| 25365 | 101 aa hypothetical protein | |||
| 25370 | M | M.SenBR027ORFEP (100% identity) | SAY | M.EcoC1720ORF25370P |
| 25375 | 73 aa hypothetical protein | |||
| plasmid unnamed8 | ||||
| 26085 | 103 aa hypothetical protein | |||
| 26090 | M | M.EcoXJ61ORF24590P (100% identity) | M.EcoC1720ORF26090P | |
| 26095 | 73 aa hypothetical protein | |||