Escherichia coli AVS0501 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli AVS0501 RM systems
Ref: Biggel,M. unpublished
REBASE ref # 31800
| Sequence length: | GenBank #: | |
| Chromosome: | 5,128,108 bp | CP124511 |
| plasmid pAVS0501-A: | 119,945 bp | CP124512 |
REBASE acronym: EcoS0501
Org_num: 67295
All begin QJP59_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8835 | type IV toxin-antitoxin system AbiEi family | |||
| 8840 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoS0501ORF8845P |
| 8845 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoS0501ORF8845P |
| 8850 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoS0501ORF8845P |
| 8855 | ash family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 165 | phosphohydrolase | |||
| 170 | M | M.SflC32DcmP (100% identity) | CCWGG | M.EcoS0501DcmP |
| 175 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoS0501DcmP |
| 180 | drug/metabolite exporter YedA | |||
| 4360 | DUF3927 family protein | |||
| 4375 | M | M.Ecos131ORF2315P (100% identity) | A | M.EcoS0501ORF4375P |
| 4380 | TrmB family transcriptional regulator | |||
| 10860 | 174 aa hypothetical protein | |||
| 10865 | M | M.Sen5773ORF4471P (100% identity) | RCCGGY | M.EcoS0501ORF10865P |
| 10870 | ATP-binding protein | |||
| 10875 | response regulator receiver domain | |||
| 10880 | R | Ecos19ORF20635P (100% identity) | EcoS0501ORF10880P | |
| 10885 | 97 aa hypothetical protein | |||
| 11855 | response regulator receiver domain | |||
| 11860 | R | EcosS3ORF15775P (100% identity) | EcoS0501ORF11865P | |
| 11865 | M | M.EcosS3ORF15775P (100% identity) | M.EcoS0501ORF11865P | |
| 11870 | conjugal transfer protein TraG N-terminal | |||
| 16325 | cell division protein DamX | |||
| 16330 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoS0501DamP |
| 16335 | ribulose-phosphate 3-epimerase | |||
| 16945 | DUF2556 family protein | |||
| 16950 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoS0501ORF16950P |
| 16955 | DNA-binding transcriptional regulator Fis | |||
| plasmid pAVS0501-A | ||||
| 25605 | 73 aa hypothetical protein | |||
| 25610 | M | M.Sfl0030ORFCP (100% identity) | SAY | M.EcoS0501ORF25610P |
| 25615 | 103 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24580 | shufflon system plasmid conjugative transfer | |||
| 24585 | R | Ecost88ORF24685P (100% identity) | EcoS0501ORF24590P | |
| 24590 | M | M.EcosS2ORF3675P (100% identity) | M.EcoS0501ORF24590P | |
| 24595 | SpnT protein | |||