Escherichia coli AVS0970 |
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Putative Escherichia coli AVS0970 RM systems
Ref: Biggel,M. unpublished
REBASE ref # 31800
| Sequence length: | GenBank #: | |
| Chromosome: | 5,077,511 bp | CP124502 |
| plasmid pAVS0970-A: | 146,767 bp | CP124503 |
REBASE acronym: EcoS0970
Org_num: 67324
All begin QJP73_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5965 | ash family protein | |||
| 5970 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoS0970ORF5975P |
| 5975 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoS0970ORF5975P |
| 5980 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoS0970ORF5975P |
| 5985 | type IV toxin-antitoxin system AbiEi family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2755 | conjugal transfer protein TraG N-terminal | |||
| 2760 | M | M.EcosS3ORF15775P (100% identity) | M.EcoS0970ORF2760P | |
| 2765 | R | EcosS3ORF15775P (100% identity) | EcoS0970ORF2760P | |
| 2770 | response regulator receiver domain | |||
| 3735 | 97 aa hypothetical protein | |||
| 3740 | R | Ecos19ORF20635P (100% identity) | EcoS0970ORF3740P | |
| 3745 | response regulator receiver domain | |||
| 3750 | ATP-binding protein | |||
| 3755 | M | M.Sen5773ORF4471P (100% identity) | RCCGGY | M.EcoS0970ORF3755P |
| 3760 | 174 aa hypothetical protein | |||
| 4025 | helix-turn-helix domain-containing protein | |||
| 4030 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoS0970ORF4030P |
| 4035 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoS0970ORF4030P |
| 4040 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoS0970ORF4030P |
| 4045 | McrC family protein | |||
| 10180 | TrmB family transcriptional regulator | |||
| 10185 | M | M.Ecos131ORF2315P (100% identity) | A | M.EcoS0970ORF10185P |
| 10200 | DUF3927 family protein | |||
| 14385 | drug/metabolite exporter YedA | |||
| 14390 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoS0970DcmP |
| 14395 | M | M.SflC32DcmP (100% identity) | CCWGG | M.EcoS0970DcmP |
| 14400 | phosphohydrolase | |||
| 22250 | DNA-binding transcriptional regulator Fis | |||
| 22255 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoS0970ORF22255P |
| 22260 | DUF2556 family protein | |||
| plasmid pAVS0970-A | ||||
| 25365 | 73 aa hypothetical protein | |||
| 25370 | M | M.Sfl0030ORFCP (100% identity) | SAY | M.EcoS0970ORF25370P |
| 25375 | 103 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14585 | SpnT protein | |||
| 14590 | M | M.EcosS2ORF3675P (100% identity) | M.EcoS0970ORF14590P | |
| 14595 | R | Ecost88ORF24685P (100% identity) | EcoS0970ORF14590P | |
| 14600 | shufflon system plasmid conjugative transfer | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4040 | Alw26I/Eco31I/Esp3I family type II restriction | |||
| 4045 | R | EcosS9McrCP (100% identity) | EcoS0970McrCP | |
| 4050 | R | EcosS3McrBP (100% identity) | EcoS0970McrBP | |
| 4055 | glycosyltransferase | |||