Escherichia coli AVS0972 |
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Putative Escherichia coli AVS0972 RM systems
Ref: Biggel,M. unpublished
REBASE ref # 31800
| Sequence length: | GenBank #: | |
| Chromosome: | 5,038,283 bp | CP124387 |
| plasmid pAVS0972-A: | 103,452 bp | CP124388 |
REBASE acronym: EcoS0972
Org_num: 67326
All begin QJB01_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17130 | endoribonuclease SymE | |||
| 17135 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoS0972ORF17145P |
| 17140 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoS0972ORF17145P |
| 17145 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoS0972ORF17145P |
| 17150 | restriction endonuclease | |||
| 18940 | ash family protein | |||
| 18945 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoS0972ORF18950P |
| 18950 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoS0972ORF18950P |
| 18955 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoS0972ORF18950P |
| 18960 | type IV toxin-antitoxin system AbiEi family | |||
| plasmid pAVS0972-A | ||||
| 25070 | IS1-like element IS1A family transposase | |||
| 25075 | M | M.SenceORFJP (94% identity) | M.EcoS0972ORF25075P | |
| 25080 | type II toxin-antitoxin system Phd/YefM family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3480 | drug/metabolite exporter YedA | |||
| 3485 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoS0972DcmP |
| 3490 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoS0972DcmP |
| 3495 | phosphohydrolase | |||
| 10675 | DNA-binding transcriptional regulator Fis | |||
| 10680 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoS0972ORF10680P |
| 10685 | DUF2556 family protein | |||
| 11275 | ribulose-phosphate 3-epimerase | |||
| 11280 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoS0972DamP |
| 11285 | cell division protein DamX | |||
| 12795 | 98 aa hypothetical protein | |||
| 12800 | R | SflFF80ORF21000P (100% identity) | YGGCCR | EcoS0972ORF12805P |
| 12805 | M | M.SflFF80ORF21000P (100% identity) | YGGCCR | M.EcoS0972ORF12805P |
| 12810 | integrase | |||
| 16775 | helix-turn-helix domain-containing protein | |||
| 16780 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoS0972ORF16780P |
| 16785 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoS0972ORF16780P |
| 16790 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoS0972ORF16780P |
| 16795 | McrC family protein | |||
| 22185 | 71 aa hypothetical protein | |||
| 22190 | M | M.KpnYN1ORFGP (89% identity) | M.EcoS0972ORF22190P | |
| 22195 | helix-turn-helix transcriptional regulator | |||
| plasmid pAVS0972-A | ||||
| 25010 | 73 aa hypothetical protein | |||
| 25015 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoS0972ORF25015P |
| 25020 | 103 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16790 | Alw26I/Eco31I/Esp3I family type II restriction | |||
| 16795 | R | EcosS9McrCP (100% identity) | EcoS0972McrCP | |
| 16800 | R | EcosS3McrBP (100% identity) | EcoS0972McrBP | |
| 16805 | glycosyltransferase | |||
| 17145 | class I SAM-dependent DNA methyltransferase | |||
| 17150 | R | Ecou021MrrP (100% identity) | EcoS0972MrrP | |
| 17155 | BrnT family toxin | |||