Citrobacter freundii CF12 |
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Putative Citrobacter freundii CF12 RM systems
Ref: Fernandez-Calvet,A. et al. unpublished
REBASE ref # 36750
| Sequence length: | GenBank #: | |
| Chromosome: | 5,033,604 bp | CP124813 |
| plasmid unnamed3: | 9,547 bp | CP124817 |
REBASE acronym: CfrCF12
Org_num: 67163
All begin QLG15_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1595 | cell division protein DamX | |||
| 1600 | M | M.Eco5172DamP (100% identity) | GATC | M.CfrCF12DamP |
| 1605 | ribulose-phosphate 3-epimerase | |||
| 3155 | 203 aa hypothetical protein | |||
| 3160 | M | M.CfrCF13ORF3175P (100% identity) | M.CfrCF12ORF3160P | |
| 3165 | R | CfrCF13ORF3175P (100% identity) | CfrCF12ORF3160P | |
| 3170 | response regulator receiver domain | |||
| 3175 | 140 aa hypothetical protein | |||
| 3180 | R | CspSL156ORF21620P (100% identity) | CfrCF12ORF3180P | |
| 3185 | HNH endonuclease | |||
| 13975 | RusA family crossover junction | |||
| 13980 | M | M.CfrCF13ORF13990P (100% identity) | M.CfrCF12ORF13980P | |
| 13985 | conserved phage C-terminal domain-containing | |||
| 14040 | 114 aa hypothetical protein | |||
| 14045 | M | M.CfrCF13ORF14055P (100% identity) | M.CfrCF12ORF14045P | |
| 14050 | 180 aa hypothetical protein | |||
| 14515 | drug/metabolite exporter YedA | |||
| 14520 | V | V.CyoL6ORF9385P (100% identity) | V.CfrCF12ORF14525P | |
| 14525 | M | M.CspSL156ORF9755P (100% identity) | CCWGG | M.CfrCF12ORF14525P |
| 14530 | phosphohydrolase | |||
| 16165 | RusA family crossover junction | |||
| 16170 | M | M1.CfrCF13ORF16180P (100% identity) | M1.CfrCF12ORF16170P | |
| 16175 | M | M2.CfrCF13ORF16180P (100% identity) | M2.CfrCF12ORF16170P | |
| 16180 | 338 aa hypothetical protein | |||
| 16230 | 175 aa hypothetical protein | |||
| 16235 | M | M.CfrCF13ORF16245P (100% identity) | M.CfrCF12ORF16235P | |
| 16240 | 100 aa hypothetical protein | |||
| 21900 | DNA-binding transcriptional regulator Fis | |||
| 21905 | M | M.Eco5172ORF4078P (100% identity) | ATGCAT | M.CfrCF12ORF21905P |
| 21910 | DUF2556 family protein | |||
| 23295 | phage portal protein | |||
| 23300 | M | M.CfrCF13ORF23410P (100% identity) | M.CfrCF12ORF23300P | |
| 23305 | 61 aa hypothetical protein | |||
| 23310 | replication endonuclease | |||
| 23315 | M | M.CfrCF13ORF23425P (100% identity) | M.CfrCF12ORF23315P | |
| 23320 | Dam family site-specific | |||
| plasmid unnamed3 | ||||
| 25395 | DNA-binding protein | |||
| 25370 | RM | Eco20023ORF285P (77% identity) | CfrCF12ORF25370P | |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8540 | shufflon system plasmid conjugative transfer | |||
| 8545 | R | CfrCF13ORF8560P (100% identity) | CfrCF12ORF8550P | |
| 8550 | M | M.CfrCF13ORF8560P (100% identity) | M.CfrCF12ORF8550P | |
| 8555 | integrase arm-type DNA-binding domain-containing | |||