Escherichia coli AVS0969 |
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Putative Escherichia coli AVS0969 RM systems
Ref: Biggel,M. unpublished
REBASE ref # 31800
| Sequence length: | GenBank #: | |
| Chromosome: | 5,132,631 bp | CP124475 |
| plasmid pAVS0969-A: | 130,369 bp | CP124476 |
| plasmid pAVS0969-B: | 86,720 bp | CP124477 |
| plasmid pAVS0969-C: | 73,258 bp | CP124478 |
REBASE acronym: EcoS0969
Org_num: 67323
All begin QJP78_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19600 | type IV toxin-antitoxin system AbiEi family | |||
| 19605 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoS0969ORF19610P |
| 19610 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoS0969ORF19610P |
| 19615 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoS0969ORF19610P |
| 19620 | ash family protein | |||
| plasmid pAVS0969-A | ||||
| 26110 | IS1-like element IS1A family transposase | |||
| 26115 | M | M.SflFF34ORF9300P (72% identity) | M.EcoS0969ORF26115P | |
| 26120 | type II toxin-antitoxin system Phd/YefM family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1705 | cell division protein DamX | |||
| 1710 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoS0969DamP |
| 1715 | ribulose-phosphate 3-epimerase | |||
| 2305 | DUF2556 family protein | |||
| 2310 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoS0969ORF2310P |
| 2315 | DNA-binding transcriptional regulator Fis | |||
| 9190 | recombination protein NinB | |||
| 9195 | M | M.Esp9308ORFFP (72% identity) | GATC | M.EcoS0969ORF9195P |
| 9200 | NinE family protein | |||
| 10485 | phosphohydrolase | |||
| 10490 | M | M.SflC32DcmP (100% identity) | CCWGG | M.EcoS0969DcmP |
| 10495 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoS0969DcmP |
| 10500 | drug/metabolite exporter YedA | |||
| 11100 | TrmB family transcriptional regulator | |||
| 11105 | M | M.SflFF71ORF900P (99% identity) | A | M.EcoS0969ORF11105P |
| 11125 | 39 aa hypothetical protein | |||
| 18195 | helix-turn-helix transcriptional regulator | |||
| 18200 | M | M.KpnYN1ORFGP (89% identity) | M.EcoS0969ORF18200P | |
| 18205 | 134 aa hypothetical protein | |||
| 21540 | McrC family protein | |||
| 21545 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoS0969ORF21550P |
| 21550 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoS0969ORF21550P |
| 21555 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoS0969ORF21550P |
| 21560 | helix-turn-helix domain-containing protein | |||
| 21840 | response regulator receiver domain | |||
| 21845 | R | Ecos19ORF20635P (100% identity) | EcoS0969ORF21845P | |
| 21850 | 97 aa hypothetical protein | |||
| plasmid pAVS0969-A | ||||
| 26050 | 73 aa hypothetical protein | |||
| 26055 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoS0969ORF26055P |
| 26060 | 103 aa hypothetical protein | |||
| plasmid pAVS0969-B | ||||
| 26280 | 103 aa hypothetical protein | |||
| 26285 | M | M.SspPIBORF23080P (100% identity) | M.EcoS0969ORF26285P | |
| 26290 | 73 aa hypothetical protein | |||
| plasmid pAVS0969-C | ||||
| 26775 | 103 aa hypothetical protein | |||
| 26780 | M | M.Sfl7ORF23565P (100% identity) | M.EcoS0969ORF26780P | |
| 26785 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21530 | glycosyltransferase | |||
| 21535 | R | EcosS3McrBP (100% identity) | EcoS0969McrBP | |
| 21540 | R | EcosS9McrCP (100% identity) | EcoS0969McrCP | |
| 21545 | Alw26I/Eco31I/Esp3I family type II restriction | |||