Escherichia coli AVS0947 |
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Putative Escherichia coli AVS0947 RM systems
Ref: Biggel,M. unpublished
REBASE ref # 31800
| Sequence length: | GenBank #: | |
| Chromosome: | 4,978,191 bp | CP124460 |
| plasmid pAVS0947-A: | 110,076 bp | CP124461 |
| plasmid pAVS0947-B: | 95,665 bp | CP124462 |
REBASE acronym: EcoS0947
Org_num: 67320
All begin QJP79_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16785 | endoribonuclease SymE | |||
| 16790 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoS0947ORF16800P |
| 16795 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoS0947ORF16800P |
| 16800 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoS0947ORF16800P |
| 16805 | restriction endonuclease | |||
| 18615 | ash family protein | |||
| 18620 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoS0947ORF18625P |
| 18625 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoS0947ORF18625P |
| 18630 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoS0947ORF18625P |
| 18635 | type IV toxin-antitoxin system AbiEi family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3520 | drug/metabolite exporter YedA | |||
| 3525 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoS0947DcmP |
| 3530 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoS0947DcmP |
| 3535 | phosphohydrolase | |||
| 10900 | DNA-binding transcriptional regulator Fis | |||
| 10905 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoS0947ORF10905P |
| 10910 | DUF2556 family protein | |||
| 11500 | ribulose-phosphate 3-epimerase | |||
| 11505 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoS0947DamP |
| 11510 | cell division protein DamX | |||
| 16420 | helix-turn-helix domain-containing protein | |||
| 16425 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoS0947ORF16425P |
| 16430 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoS0947ORF16425P |
| 16435 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoS0947ORF16425P |
| 16440 | McrC family protein | |||
| 22100 | 71 aa hypothetical protein | |||
| 22105 | M | M.KpnYN1ORFGP (89% identity) | M.EcoS0947ORF22105P | |
| 22110 | helix-turn-helix transcriptional regulator | |||
| plasmid pAVS0947-A | ||||
| 24710 | 103 aa hypothetical protein | |||
| 24715 | M | M.Eco1637ORF26475P (99% identity) | M.EcoS0947ORF24715P | |
| 24720 | 73 aa hypothetical protein | |||
| plasmid pAVS0947-B | ||||
| 25215 | 103 aa hypothetical protein | |||
| 25220 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoS0947ORF25220P |
| 25225 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16435 | Alw26I/Eco31I/Esp3I family type II restriction | |||
| 16440 | R | EcosS9McrCP (100% identity) | EcoS0947McrCP | |
| 16445 | R | EcosS3McrBP (100% identity) | EcoS0947McrBP | |
| 16450 | glycosyltransferase | |||
| 16800 | class I SAM-dependent DNA methyltransferase | |||
| 16805 | R | Ecou021MrrP (100% identity) | EcoS0947MrrP | |
| 16810 | BrnT family toxin | |||