Escherichia coli AVS0155 |
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Putative Escherichia coli AVS0155 RM systems
Ref: Biggel,M. unpublished
REBASE ref # 31800
| Sequence length: | GenBank #: | |
| Chromosome: | 5,017,462 bp | CP124420 |
| plasmid pAVS0155-A: | 127,206 bp | CP124421 |
REBASE acronym: EcoS0155
Org_num: 67277
All begin QJP63_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19560 | endoribonuclease SymE | |||
| 19565 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoS0155ORF19575P |
| 19570 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoS0155ORF19575P |
| 19575 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoS0155ORF19575P |
| 19580 | restriction endonuclease | |||
| plasmid pAVS0155-A | ||||
| 25115 | IS1-like element IS1A family transposase | |||
| 25120 | R | KpnKPH1ORF27575P (100% identity) | CAAYNNNNNCTGG | EcoS0155ORF25130P |
| 25125 | S | S.SenBR076ORFFP (100% identity) | CAAYNNNNNCTGG | S1.EcoS0155ORF25130P |
| 25130 | M | M.SenceORFJP (99% identity) | CAAYNNNNNCTGG | M.EcoS0155ORF25130P |
| 25135 | type II toxin-antitoxin system Phd/YefM family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 370 | 71 aa hypothetical protein | |||
| 375 | M | M.KpnYN1ORFGP (89% identity) | M.EcoS0155ORF375P | |
| 380 | helix-turn-helix transcriptional regulator | |||
| 2630 | TrmB family transcriptional regulator | |||
| 2635 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoS0155ORF2635P |
| 2650 | DUF3927 family protein | |||
| 6220 | drug/metabolite exporter YedA | |||
| 6225 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoS0155DcmP |
| 6230 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoS0155DcmP |
| 6235 | phosphohydrolase | |||
| 13385 | DNA-binding transcriptional regulator Fis | |||
| 13390 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoS0155ORF13390P |
| 13395 | DUF2556 family protein | |||
| 13995 | ribulose-phosphate 3-epimerase | |||
| 14000 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoS0155DamP |
| 14005 | cell division protein DamX | |||
| 19185 | helix-turn-helix domain-containing protein | |||
| 19190 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoS0155ORF19190P |
| 19195 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoS0155ORF19190P |
| 19200 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoS0155ORF19190P |
| 19205 | McrC family protein | |||
| plasmid pAVS0155-A | ||||
| 25055 | 73 aa hypothetical protein | |||
| 25060 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoS0155ORF25060P |
| 25065 | 103 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19200 | Alw26I/Eco31I/Esp3I family type II restriction | |||
| 19205 | R | EcosS9McrCP (100% identity) | EcoS0155McrCP | |
| 19210 | R | EcosS3McrBP (100% identity) | EcoS0155McrBP | |
| 19215 | glycosyltransferase | |||
| 19575 | class I SAM-dependent DNA methyltransferase | |||
| 19580 | R | Ecou021MrrP (100% identity) | EcoS0155MrrP | |
| 19585 | BrnT family toxin | |||