Vibrio species YMD68 |
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Putative Vibrio species YMD68 RM systems
Ref: Zhang,J. and Xu,X. unpublished
REBASE ref # 34233
| Sequence length: | GenBank #: | |
| chromosome 2: | 3,345,673 bp | CP124614 |
| plasmid unnamed1: | 168,227 bp | CP124615 |
REBASE acronym: Vsp68
Org_num: 67740
All begin QF117_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 2 | ||||
| 10865 | 94 aa hypothetical protein | |||
| 10870 | M | M.Vgi22741ORFBP (88% identity) | M.Vsp68ORF10870P | |
| 10875 | S | S.Vme2478ORFAP (58% identity) | S.Vsp68ORF10870P | |
| 10880 | R | Vci139882ORFAP (78% identity) | Vsp68ORF10870P | |
| 10885 | 630 aa hypothetical protein | |||
| 13410 | helix-turn-helix domain-containing protein | |||
| 13415 | M | M1.Vsp12BORF26314P (98% identity) | M1.Vsp68ORF13415P | |
| 13420 | 437 aa hypothetical protein | |||
| 13425 | M | M2.PspAPM04ORF405P (95% identity) | M2.Vsp68ORF13415P | |
| 13430 | S | S.PspG3ORF12550P (41% identity) | S.Vsp68ORF13415P | |
| 13435 | R | Vsp12BORF26314P (96% identity) | Vsp68ORF13415P | |
| 13440 | 245 aa hypothetical protein | |||
| 13445 | AAA family ATPase | |||
| 13450 | M | M.Aan24636ORF2018P (38% identity) | M.Vsp68ORF13450P | |
| 13455 | AAA domain-containing protein | |||
| 19960 | 246 aa hypothetical protein | |||
| 19965 | M | M.VspFE10ORFDP (97% identity) | M.Vsp68ORF19965P | |
| 19970 | S | S.PspJ15ORFAP (69% identity) | S.Vsp68ORF19965P | |
| 19975 | HrgA protein | |||
| 19980 | R | VcrJ55ORF1280018P (93% identity) | Vsp68ORF19965P | |
| 19985 | 314 aa hypothetical protein | |||
| 20155 | 314 aa hypothetical protein | |||
| 20160 | R | VcrJ55ORF1330002P (96% identity) | Vsp68ORF20175P | |
| 20165 | 396 aa hypothetical protein | |||
| 20170 | S | S.PciZF2ORF19890P (59% identity) | S.Vsp68ORF20175P | |
| 20175 | M | M.Vco116AORF22585P (86% identity) | M.Vsp68ORF20175P | |
| 20180 | tyrosine-type recombinase/integrase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 2 | ||||
| 8565 | DUF262 domain-containing protein | |||
| 8570 | RM | Ace42154ORFAP (99% identity) | Vsp68ORF8570P | |
| 8575 | BREX-1 system phosphatase PglZ type A | |||
| 12195 | DinI-like family protein | |||
| 12200 | M | M.VcrJ55ORF750066P (98% identity) | M.Vsp68ORF12200P | |
| 12205 | 63 aa hypothetical protein | |||
| 19195 | 327 aa hypothetical protein | |||
| 19200 | R | Vna237ORF16965P (74% identity) | Vsp68ORF19205P | |
| 19205 | M | M.Vna237ORF16965P (81% identity) | M.Vsp68ORF19205P | |
| 19210 | pyocin activator PrtN family protein | |||
| plasmid unnamed1 | ||||
| 21655 | 91 aa hypothetical protein | |||
| 21660 | M | M.Pdaa311ORF38110P (100% identity) | M.Vsp68ORF21660P | |
| 21665 | 80 aa hypothetical protein | |||
| 22260 | 112 aa hypothetical protein | |||
| 22265 | M | M.VfuMT14ORF22460P (100% identity) | M.Vsp68ORF22265P | |
| 22270 | 305 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid unnamed1 | ||||
| 21895 | 76 aa hypothetical protein | |||
| 21900 | R | VchW7GORF20020P (97% identity) | Vsp68ORF21905P | |
| 21905 | M | M.Esp975ORF24210P (80% identity) | M.Vsp68ORF21905P | |
| 21910 | 94 aa hypothetical protein | |||