Streptomyces species SH5 |
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Putative Streptomyces species SH5 RM systems
Ref: Xu,D. and Liu,G. unpublished
REBASE ref # 36716
Complete sequence: 7,779,627 bp
GenBank #: CP123780
REBASE acronym: SspSH5
Org_num: 67082
All begin QFA72_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 30535 | DUF397 domain-containing protein | |||
| 30540 | R | Ssp6116ORF22300P (98% identity) | SspSH5ORF30550P | |
| ??? | S | S.SspDH12ORF4825P (42% identity) | S.SspSH5ORF30550P | |
| 30550 | M | M2.San01ORF32715P (95% identity) | M2.SspSH5ORF30550P | |
| 30555 | M | M1.San01ORF32715P (94% identity) | M1.SspSH5ORF30550P | |
| 30560 | DNA sulfur modification protein DndB | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3140 | UvrD-helicase domain-containing protein | |||
| 3145 | M | M.Ssp259ORF4090P (92% identity) | M.SspSH5ORF3145P | |
| 3150 | DUF5655 domain-containing protein | |||
| 3150 | DUF5655 domain-containing protein | |||
| 3155 | M | M.Sun5ORF8970P (100% identity) | M.SspSH5ORF3155P | |
| 3160 | methyltransferase, FxLD system | |||
| 11930 | Z1 domain-containing protein | |||
| 11935 | V | V.SspEN27ORFDP (78% identity) | V.SspSH5ORF11940P | |
| 11940 | M | M2.Ssp6116ORF6090P (91% identity) | M1.SspSH5ORF11940P | |
| 11945 | M | M2.Sfi8ORF14015P (96% identity) | M2.SspSH5ORF11940P | |
| 11955 | 330 aa hypothetical protein | |||
| 13225 | 201 aa hypothetical protein | |||
| 13230 | M | M.SspEN23ORFCP (89% identity) | M.SspSH5ORF13230P | |
| 13235 | 244 aa hypothetical protein | |||
| 16505 | DNA polymerase III subunit gamma and tau | |||
| 16520 | M | M.SspL053ORF17060P (99% identity) | M.SspSH5ORF16520P | |
| 16525 | R | SpaFG2ORFBP (99% identity) | SspSH5ORF16520P | |
| 16530 | 196 aa hypothetical protein | |||
| 30490 | 126 aa hypothetical protein | |||
| 30495 | RM | San14ORF5475P (89% identity) | SspSH5ORF30495P | |
| 30500 | UvrD-helicase domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3125 | sigma-70 family RNA polymerase sigma factor | |||
| 3130 | R | Ssp233McrBP (98% identity) | SspSH5McrBP | |
| 3135 | R | Ssp233McrCP (97% identity) | SspSH5McrCP | |
| 3140 | UvrD-helicase domain-containing protein | |||