Klebsiella pneumoniae subsp. pneumoniae IITJ_BC16 |
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Putative Klebsiella pneumoniae subsp. pneumoniae IITJ_BC16 RM systems
Ref: Chakrabortty,A. et al. unpublished
REBASE ref # 36578
| Sequence length: | GenBank #: | |
| Chromosome: | 5,304,938 bp | CP122469 |
| plasmid pBC16_IncFIA_IncFIIK: | 146,164 bp | CP122470 |
| plasmid pBC16_IncFIBpKPHS1: | 112,541 bp | CP122471 |
| plasmid pBC16_IncFII: | 103,532 bp | CP122472 |
REBASE acronym: KpnBC16
Org_num: 66666
All begin P9M40_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23165 | restriction endonuclease | |||
| 23170 | M | M.Kpnx197ORFGP (100% identity) | CTCANNNNNNTCC | M.KpnBC16ORF23170P |
| 23175 | S | S.Kpnx197ORFGP (100% identity) | CTCANNNNNNTCC | S.KpnBC16ORF23170P |
| 23180 | R | Kpnx197ORFGP (100% identity) | CTCANNNNNNTCC | KpnBC16ORF23170P |
| 23185 | 67 aa hypothetical protein | |||
| plasmid pBC16_IncFIA_IncFIIK | ||||
| 27020 | IS1 family transposase | |||
| 27025 | M | M.Sma1761ORF1255P (100% identity) | GTGANNNNNNNTGG | M.KpnBC16ORF27025P |
| 27030 | S | S.Sma1761ORF1255P (100% identity) | GTGANNNNNNNTGG | S.KpnBC16ORF27025P |
| 27035 | YecA family protein | |||
| 27040 | cold shock domain-containing protein | |||
| 27045 | R | KpnP35ORF26690P (100% identity) | GTGANNNNNNNTGG | KpnBC16ORF27025P |
| 27050 | SprT family zinc-dependent metalloprotease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1825 | cell division protein DamX | |||
| 1830 | M | M.Kpnx197DamP (100% identity) | GATC | M.KpnBC16DamP |
| 1835 | ribulose-phosphate 3-epimerase | |||
| 8405 | phosphohydrolase | |||
| 8410 | M | M.Ksp54798DcmP (100% identity) | CCWGG | M.KpnBC16DcmP |
| 8415 | V | V.Kpnx197DcmP (100% identity) | V.KpnBC16DcmP | |
| 8420 | drug/metabolite exporter YedA | |||
| 9260 | dcm methylase | |||
| 9265 | M | M.Kpnx197ORFDP (100% identity) | GATC | M.KpnBC16ORF9265P |
| 9270 | DUF1317 family protein | |||
| 15835 | replication endonuclease | |||
| 15840 | M | M.Kpnx197ORFIP (99% identity) | GATC | M.KpnBC16ORF15840P |
| 15845 | 3-5 exoribonuclease | |||
| 20035 | YqaJ viral recombinase family protein | |||
| 20040 | M | M.Kpnx197ORFEP (100% identity) | GATC | M.KpnBC16ORF20040P |
| 20045 | TraR/DksA family transcriptional regulator | |||
| plasmid pBC16_IncFIA_IncFIIK | ||||
| 26675 | 56 aa hypothetical protein | |||
| 26680 | M | M.Kqu7BL08ORF20710P (100% identity) | M.KpnBC16ORF26680P | |
| 26685 | 73 aa hypothetical protein | |||
| plasmid pBC16_IncFIBpKPHS1 | ||||
| 27590 | 77 aa hypothetical protein | |||
| 27595 | M | M.KpnPtORF27450P (100% identity) | GATC | M.KpnBC16ORF27595P |
| 27600 | 277 aa hypothetical protein | |||
| plasmid pBC16_IncFII | ||||
| 27945 | 102 aa hypothetical protein | |||
| 27950 | M | M.SenST46ORF25580P (100% identity) | M.KpnBC16ORF27950P | |
| 27955 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23160 | PLP-dependent aminotransferase family protein | |||
| 23165 | R | Kqu0MrrP (100% identity) | KpnBC16MrrP | |
| 23170 | class I SAM-dependent DNA methyltransferase | |||