Glaesserella parasuis d76 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Glaesserella parasuis d76 RM systems
Ref: Che,Y. and Zhou,L. unpublished
REBASE ref # 28502
Complete sequence: 2,326,913 bp
GenBank #: CP121768
REBASE acronym: Gpad76
Org_num: 66618
All begin QBK97_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5050 | 3-phosphoserine/phosphohydroxythreonine | |||
| 5055 | M | M.GpaHPS7ORF5710P (99% identity) | M.Gpad76ORF5055P | |
| 5060 | S | S.Gpa4557ORF1275P (67% identity) | S.Gpad76ORF5055P | |
| 5065 | R | Pae728ORF11060P (5% identity) | Gpad76ORF5055AP | |
| 5070 | R | HpaST41ORF935P (22% identity) | Gpad76ORF5055BP | |
| 5075 | histidinol-phosphate transaminase | |||
| 9675 | 87 aa hypothetical protein | |||
| 9680 | R | HpaD74ORF753P (98% identity) | Gpad76ORF9705P | |
| 9685 | 145 aa hypothetical protein | |||
| 9690 | DUF1829 domain-containing protein | |||
| 9695 | S | S.Gpa1807ORF10310P (97% identity) | S.Gpad76ORF9705P | |
| 9700 | AAA family ATPase | |||
| 9705 | M | M.HpaSW140ORF1427P (99% identity) | M.Gpad76ORF9705P | |
| 9710 | transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 335 | valine--tRNA ligase | |||
| 340 | M | M.Gpa1433ORF275P (100% identity) | AAGCTT | M.Gpad76ORF340P |
| ??? | R | GpaHPS7ORF245P (100% identity) | AAGCTT | Gpad76ORF340P |
| 355 | zeta toxin family protein | |||
| 940 | MarR family winged helix-turn-helix | |||
| 945 | RM | HpaMNHORF1496P (100% identity) | Gpad76ORF945P | |
| 950 | S | S1.GpaHPS7ORF7310P (100% identity) | S1.Gpad76ORF945P | |
| 955 | S | S2.Gpa1433ORF885P (100% identity) | S2.Gpad76ORF945P | |
| 960 | virulence RhuM family protein | |||
| 1235 | type II toxin-antitoxin system VapC family | |||
| 1240 | RM | HpaSH03ORF7930P (100% identity) | Gpad76ORF1250P | |
| 1245 | M | M2.HpaSH03ORF7930P (100% identity) | M2.Gpad76ORF1250P | |
| 1250 | M | M1.HpaSH03ORF7930P (100% identity) | M1.Gpad76ORF1250P | |
| 1255 | 112 aa hypothetical protein | |||
| 3215 | sodium-dependent transporter | |||
| 3220 | M | M.HpaST41ORF8035P (100% identity) | GATC | M.Gpad76ORF3220P |
| 3225 | 3-dehydroquinate synthase | |||
| 7435 | transposase | |||
| 7440 | M | Gpa4557IV (39% identity) | M1.Gpad76ORF7440P | |
| 7445 | M | M.GpaHPS12ORF7180P (41% identity) | M2.Gpad76ORF7440P | |
| 7450 | 196 aa hypothetical protein | |||
| 8415 | enoyl-CoA hydratase | |||
| 8420 | M | M.GpaHPS7ORF2660P (100% identity) | M.Gpad76ORF8420P | |
| 8425 | 86 aa hypothetical protein | |||
| 10035 | 90 aa hypothetical protein | |||
| 10040 | S | S.Gpa1433ORF9695P (100% identity) | S.Gpad76ORF10045P | |
| ??? | RM | GpaHPS7ORF9695P (100% identity) | GAGNNNNRTAA | Gpad76ORF10045P |
| 10055 | ABC transporter six-transmembrane | |||
| 10070 | 192 aa hypothetical protein | |||
| 10075 | R | GpaHPS7ORF9725P (100% identity) | Gpad76ORF10080P | |
| 10080 | M | M.GpaHPS7ORF9725P (100% identity) | M.Gpad76ORF10080P | |
| 10085 | NADH:flavin oxidoreductase/NADH oxidase family | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9750 | FAD-dependent oxidoreductase | |||
| 9755 | R | GpaXP11GmrSDP (99% identity) | Gpad76GmrSDP | |
| 9760 | amino acid ABC transporter ATP-binding protein | |||