Glaesserella parasuis Z44 |
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Putative Glaesserella parasuis Z44 RM systems
Ref: Che,Y. and Zhou,L. unpublished
REBASE ref # 28502
Complete sequence: 2,570,710 bp
GenBank #: CP121769
REBASE acronym: GpaZ44
Org_num: 66617
All begin QBL01_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 400 | tRNA uridine-5-carboxymethylaminomethyl(34) | |||
| 405 | S | S.HpaSW114ORF1076P (100% identity) | S.GpaZ44ORF420P | |
| 410 | R | Gpa170504ORF12025P (99% identity) | GpaZ44ORF420P | |
| 415 | ATP-binding protein | |||
| 420 | M | M.GpaHPS12ORF10755P (100% identity) | M.GpaZ44ORF420P | |
| 425 | 16S rRNA (guanine(527)-N(7))-methyltransferase | |||
| 2450 | 104 aa hypothetical protein | |||
| 2455 | M | M.HpaSW114ORF1565P (100% identity) | M.GpaZ44ORF2455P | |
| 2460 | 82 aa hypothetical protein | |||
| 2465 | 118 aa hypothetical protein | |||
| 2470 | 128 aa hypothetical protein | |||
| 2475 | S | S.HpaSW114ORF1565P (38% identity) | S1.GpaZ44ORF2455P | |
| 2480 | S | S.HpaSW114ORF1565P (54% identity) | S2.GpaZ44ORF2455P | |
| 2485 | DUF1829 domain-containing protein | |||
| 2490 | 56 aa hypothetical protein | |||
| 2495 | 72 aa hypothetical protein | |||
| 2500 | R | Gpa1433ORF9165P (99% identity) | GpaZ44ORF2455P | |
| 2505 | 87 aa hypothetical protein | |||
| 12030 | 153 aa hypothetical protein | |||
| 12035 | S | S.Mcy97732ORF2305P (55% identity) | S.GpaZ44ORF12035P | |
| 12040 | 262 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1085 | valine--tRNA ligase | |||
| 1090 | M | M.Hpa74I (99% identity) | AAGCTT | M.GpaZ44ORF1090P |
| 1095 | R | Gpad76ORF340P (99% identity) | AAGCTT | GpaZ44ORF1090P |
| 1100 | zeta toxin family protein | |||
| 1305 | MarR family winged helix-turn-helix | |||
| 1310 | RM | HpaMNHORF1496P (99% identity) | GpaZ44ORF1310P | |
| 1315 | S | S.HpaMNHORF1496P (99% identity) | S1.GpaZ44ORF1310P | |
| 1320 | S | S.HpaD74ORF1723P (41% identity) | S2.GpaZ44ORF1310P | |
| 1325 | virulence RhuM family protein | |||
| 4640 | high frequency lysogenization protein HflD | |||
| 4645 | R | HpaSW114ORF577P (100% identity) | GGCC | GpaZ44ORF4650P |
| 4650 | M | M.HpaSW114ORF577P (100% identity) | GGCC | M.GpaZ44ORF4650P |
| 4655 | endopeptidase La | |||
| 6925 | replication protein P | |||
| 6930 | M | M.MvaF222ORF5150P (92% identity) | M.GpaZ44ORF6930P | |
| 6935 | 71 aa hypothetical protein | |||
| 7165 | enoyl-CoA hydratase | |||
| 7170 | M | M.GpaHF57ORF4725P (97% identity) | M.GpaZ44ORF7170P | |
| 7175 | 86 aa hypothetical protein | |||
| 9740 | 3-dehydroquinate synthase | |||
| 9745 | M | M.Hpa318ORF3730P (99% identity) | GATC | M.GpaZ44ORF9745P |
| 9750 | sodium-dependent transporter | |||
| 11670 | 93 aa hypothetical protein | |||
| 11675 | M | M.HpaSHORF1954P (100% identity) | M.GpaZ44ORF11675P | |
| 11680 | R | Hpa74ORFLP (99% identity) | GpaZ44ORF11675P | |
| 11685 | restriction endonuclease subunit S | |||
| 11680 | DUF262 domain-containing protein | |||
| 11685 | S | S.Gpa170504ORF11065P (99% identity) | S.GpaZ44ORF11690P | |
| 11690 | RM | Ami305ORF9406P (99% identity) | GAGNNNNRTAA | GpaZ44ORF11690P |
| 11695 | ISAs1 family transposase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11450 | FAD-dependent oxidoreductase | |||
| 11455 | R | Gpa4GmrSDP (99% identity) | GpaZ44GmrSDP | |
| 11460 | amino acid ABC transporter ATP-binding protein | |||