Escherichia coli VE-T10 |
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Putative Escherichia coli VE-T10 RM systems
Ref: Suzuki,M. et al. unpublished
REBASE ref # 36547
| Sequence length: | GenBank #: | |
| Chromosome: | 4,887,921 bp | AP027957 |
| plasmid pVE-T10_1: | 81,505 bp | AP027958 |
REBASE acronym: EcoVET10
Org_num: 66553
All begin VET10_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 39030 | 119 aa hypothetical protein | |||
| 39040 | R | SflN101ORF11675P (100% identity) | CCANNNNNNNNNTTGG | EcoVET10ORF39050P |
| 39050 | M | M.SflTORF4636P (98% identity) | CCANNNNNNNNNTTGG | M.EcoVET10ORF39050P |
| 39060 | S | S.SflN101ORF11675P (100% identity) | CCANNNNNNNNNTTGG | S.EcoVET10ORF39050P |
| 39070 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4250 | cell division protein DamX | |||
| ??? | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoVET10DamP |
| 4270 | ribulose-phosphate 3-epimerase | |||
| 5230 | acrEF/envCD operon transcriptional regulator | |||
| 5240 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoVET10ORF5240P |
| 5250 | DNA-binding protein Fis | |||
| 18110 | 322 aa hypothetical protein | |||
| ??? | M | M.EcoVET2ORFAP (100% identity) | M.EcoVET10ORFAP | |
| 18130 | protein ninF | |||
| 18980 | phosphohydrolase | |||
| 18990 | M | M.SdySWHE2DcmP (100% identity) | CCWGG | M.EcoVET10DcmP |
| 19000 | V | V.EcosEC7DcmP (100% identity) | CCWGG | V.EcoVET10DcmP |
| 19010 | inner membrane transporter YedA | |||
| 32810 | 63 aa hypothetical protein | |||
| 32820 | M | M.EcoWW2ORF16975P (100% identity) | M.EcoVET10ORF32820P | |
| 32830 | 64 aa hypothetical protein | |||
| 39410 | 9-O-acetyl-N-acetylneuraminic acid | |||
| ??? | R | SflN101ORF11875P (100% identity) | EcoVET10ORF39420P | |
| 39440 | 691 aa hypothetical protein | |||
| plasmid pVE-T10_1 | ||||
| 45710 | 145 aa hypothetical protein | |||
| 45720 | M | M.SflN92ORF24820P (100% identity) | M.EcoVET10ORF45720P | |
| 45730 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 39070 | endoribonuclease SymE | |||
| ??? | R | SflN101GmrSP (100% identity) | EcoVET10GmrSP | |
| 39100 | 49 aa hypothetical protein | |||
| 39430 | 187 aa hypothetical protein | |||
| 39440 | R | SflN101McrBP (100% identity) | EcoVET10McrBP | |
| 39450 | R | SflN101McrCP (100% identity) | EcoVET10McrCP | |
| 39460 | 164 aa hypothetical protein | |||