Salmonella enterica AUSMDU00021621 |
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Putative Salmonella enterica AUSMDU00021621 RM systems
Ref: Sikorski,M. et al. unpublished
REBASE ref # 36419
Complete sequence: 4,780,034 bp
GenBank #: CP090240
REBASE acronym: Sen21621
Org_num: 66811
All begin LWR26_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5220 | endoribonuclease SymE | |||
| 5225 | S | S.StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | S.Sen21621ORF5230P |
| 5230 | M | M.StyTORF4575P (99% identity) | GAANNNNNNNNTCGC | M.Sen21621ORF5230P |
| 5235 | R | StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | Sen21621ORF5230P |
| 5240 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1720 | cell division protein DamX | |||
| 1725 | M | M.StyTDamP (100% identity) | GATC | M.Sen21621DamP |
| 1730 | ribulose-phosphate 3-epimerase | |||
| 4005 | replication endonuclease | |||
| 4010 | M | M.StyTORF4329P (100% identity) | GATC | M.Sen21621ORF4010P |
| 4015 | 3-5 exonuclease | |||
| 5095 | 64 aa hypothetical protein | |||
| 5100 | R | Senst12ORF9665P (100% identity) | Sen21621ORF5100P | |
| 5105 | YebC/PmpR family DNA-binding transcriptional | |||
| 7045 | replication endonuclease | |||
| 7050 | M | M.StyTORF3409P (100% identity) | GATC | M.Sen21621ORF7050P |
| 7055 | TraR/DksA family transcriptional regulator | |||
| 10835 | phosphohydrolase | |||
| 10840 | M | M.StyTDcmP (100% identity) | CCWGG | M.Sen21621DcmP |
| 10845 | V | V.StyTDcmP (100% identity) | CCWGG | V.Sen21621DcmP |
| 10850 | drug/metabolite exporter YedA | |||
| 16175 | DGQHR domain-containing protein | |||
| 16180 | M | M.StyTORF1926P (95% identity) | M.Sen21621ORF16180P | |
| 16185 | DUF4060 family protein | |||
| 23255 | DNA-binding transcriptional regulator Fis | |||
| 23260 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen21621ORF23260P |
| 23265 | DUF2556 family protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10755 | shufflon system plasmid conjugative transfer | |||
| 10760 | R | StyTORF872P (100% identity) | CAAACC | Sen21621ORF10765P |
| 10765 | M | M.SmaBWH35ORF16840P (100% identity) | CAAACC | M.Sen21621ORF10765P |
| 10770 | SpnT protein | |||
| 19100 | small effector SsaA | |||
| 19105 | R | Senr1ORF17185P (99% identity) | CAGAG | Sen21621ORF19110P |
| 19110 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen21621ORF19110P |
| 19115 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5235 | type I restriction-modification system | |||
| 5240 | R | StyTMrrP (100% identity) | Sen21621MrrP | |
| 5245 | BrnT family toxin | |||