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Putative Escherichia coli RHB31-SO-C03 RM systems
Ref: Matlock,W. unpublished
REBASE ref # 36523
Sequence length: | GenBank #: | |
Chromosome: | 4,660,104 bp | CP099123 |
plasmid unnamed1: | 196,295 bp | CP099124 |
plasmid unnamed2: | 118,824 bp | CP099125 |
plasmid unnamed3: | 110,641 bp | CP099126 |
REBASE acronym: Eco31SOC03
Org_num: 66486
All begin NFK49_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
9180 | 19 aa hypothetical protein | |||
9185 | S | S.Eco0673ORF9290P (57% identity) | S.Eco31SOC03ORF9185P | |
9190 | YecA family protein | |||
9195 | cold shock domain-containing protein | |||
9200 | R | Eco0673ORF9290P (100% identity) | Eco31SOC03ORF9185P | |
9205 | M48 family metallopeptidase | |||
19035 | DUF262 domain-containing HNH endonuclease family | |||
19040 | R | SspS13ORF3945P (100% identity) | RTCANNNNNNNNGTGG | Eco31SOC03ORF19045P |
19045 | M | M.SspS13ORF3945P (100% identity) | RTCANNNNNNNNGTGG | M.Eco31SOC03ORF19045P |
19050 | S | S.SspS13ORF3945P (100% identity) | RTCANNNNNNNNGTGG | S.Eco31SOC03ORF19045P |
19055 | endoribonuclease SymE | |||
plasmid unnamed2 | ||||
23980 | DNA polymerase III subunit theta | |||
23985 | M | M.Eco5008ORF340P (99% identity) | GAANNNNNNTAYG | M.Eco31SOC03ORF23985P |
23395 | S | S.Ecoi162ORF4671P (99% identity) | GAANNNNNNTAYG | S.Eco31SOC03ORF23985P |
23400 | R | EcoR31ORF22360P (100% identity) | GAANNNNNNTAYG | Eco31SOC03ORF23985P |
23405 | 3-phosphatase | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
1710 | cell division protein DamX | |||
1715 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco31SOC03DamP |
1720 | ribulose-phosphate 3-epimerase | |||
2335 | DUF2556 family protein | |||
2340 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco31SOC03ORF2340P |
2345 | DNA-binding transcriptional regulator Fis | |||
10995 | DUF977 family protein | |||
11000 | M | M.SsoSE61ORF20220P (100% identity) | M.Eco31SOC03ORF11000P | |
11005 | 139 aa hypothetical protein | |||
plasmid unnamed1 | ||||
22740 | 56 aa hypothetical protein | |||
22745 | M | M.StyCORF187P (100% identity) | CCWGG | M.Eco31SOC03ORF22745P |
22750 | thermonuclease family protein | |||
23280 | DNA-binding protein | |||
23285 | M | M.Ype21801ORF197P (100% identity) | M.Eco31SOC03ORF23285P | |
23290 | 273 aa hypothetical protein | |||
plasmid unnamed2 | ||||
23495 | SPFH domain-containing protein | |||
23510 | M | M.Sen9860ORF25540P (99% identity) | M.Eco31SOC03ORF23510P | |
23515 | recombination-associated protein RdgC | |||
plasmid unnamed3 | ||||
24525 | 76 aa hypothetical protein | |||
24530 | M | M.EcoB1109aORFFP (100% identity) | M.Eco31SOC03ORF24530P | |
24535 | 269 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
19055 | endoribonuclease SymE | |||
??? | R | EcoS14GmrSDP (100% identity) | Eco31SOC03GmrSDP | |
19070 | cytoplasmic protein |