Escherichia coli RHB47-C15 |
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Putative Escherichia coli RHB47-C15 RM systems
Ref: Matlock,W. unpublished
REBASE ref # 36523
| Sequence length: | GenBank #: | |
| Chromosome: | 4,695,997 bp | CP098933 |
| plasmid unnamed1: | 98,483 bp | CP098934 |
| plasmid unnamed2: | 98,231 bp | CP098935 |
| plasmid unnamed3: | 53,464 bp | CP098936 |
REBASE acronym: Eco47C15
Org_num: 66546
All begin NFL60_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1415 | type I restriction-modification system subunit M | |||
| 1420 | RM | Efe41C23ORF15565P (100% identity) | CTGAAG | Eco47C15ORF1425P |
| 1425 | M | M.EcoC9969I (100% identity) | CTGAAG | M.Eco47C15ORF1425P |
| 1430 | 62 aa hypothetical protein | |||
| 2210 | IS3-like element IS911 family transposase | |||
| 2215 | R | Eco47C09ORF2215P (100% identity) | Eco47C15ORF2215P | |
| 2220 | sigma 54-interacting transcriptional regulator | |||
| 4025 | GGDEF domain-containing protein | |||
| 4030 | M | M.Sso8033ORF3755P (100% identity) | CCWGG | M.Eco47C15ORF4030P |
| 4035 | R | EcoZ144ORF4685P (100% identity) | CCWGG | Eco47C15ORF4030P |
| 4040 | 321 aa hypothetical protein | |||
| 5065 | copper-exporting P-type ATPase CopA | |||
| 5070 | M | M.Eco47C09ORF5050P (100% identity) | M.Eco47C15ORF5070P | |
| 5075 | ogr/Delta-like zinc finger family protein | |||
| 12750 | drug/metabolite exporter YedA | |||
| 12755 | V | V.Ecos195DcmP (100% identity) | V.Eco47C15DcmP | |
| 12760 | M | M.Ecos67DcmP (100% identity) | CCWGG | M.Eco47C15DcmP |
| 12765 | phosphohydrolase | |||
| 19105 | DNA-binding transcriptional regulator Fis | |||
| 19110 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Eco47C15ORF19110P |
| 19115 | DUF2556 family protein | |||
| 19730 | ribulose-phosphate 3-epimerase | |||
| 19735 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco47C15DamP |
| 19740 | cell division protein DamX | |||
| plasmid unnamed1 | ||||
| 22920 | group II intron reverse transcriptase/maturase | |||
| 22925 | M | M.SenBR027ORFEP (89% identity) | M.Eco47C15ORF22925P | |
| 22930 | 73 aa hypothetical protein | |||
| plasmid unnamed2 | ||||
| 23710 | 73 aa hypothetical protein | |||
| 23715 | M | M.SflN92ORF24820P (89% identity) | M.Eco47C15ORF23715P | |
| 23720 | group II intron reverse transcriptase/maturase | |||
| plasmid unnamed3 | ||||
| 23975 | group II intron reverse transcriptase/maturase | |||
| 23980 | M | M.Ecoppa9ORF24505P (89% identity) | M.Eco47C15ORF23980P | |
| 23985 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1400 | zinc-ribbon domain-containing protein | |||
| 1405 | R | Eco47SOC04McrBP (100% identity) | Eco47C15McrBP | |
| 1410 | R | Eco47SOC04McrCP (100% identity) | Eco47C15McrCP | |
| 1415 | type I restriction-modification system subunit M | |||