Escherichia coli RHB47-C09 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli RHB47-C09 RM systems
Ref: Matlock,W. unpublished
REBASE ref # 36523
| Sequence length: | GenBank #: | |
| Chromosome: | 4,702,201 bp | CP098940 |
| plasmid unnamed1: | 99,307 bp | CP098941 |
| plasmid unnamed2: | 98,762 bp | CP098942 |
| plasmid unnamed3: | 55,048 bp | CP098943 |
REBASE acronym: Eco47C09
Org_num: 66545
All begin NFL57_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1415 | type I restriction-modification system subunit M | |||
| 1420 | RM | Efe41C23ORF15565P (100% identity) | CTGAAG | Eco47C09ORF1425P |
| 1425 | M | M.EcoC9969I (100% identity) | CTGAAG | M.Eco47C09ORF1425P |
| 1430 | 62 aa hypothetical protein | |||
| 2210 | IS3-like element IS911 family transposase | |||
| 2215 | R | Eco47C15ORF2215P (100% identity) | Eco47C09ORF2215P | |
| 2220 | sigma 54-interacting transcriptional regulator | |||
| 4015 | GGDEF domain-containing protein | |||
| 4020 | M | M.Sso8033ORF3755P (100% identity) | CCWGG | M.Eco47C09ORF4020P |
| 4025 | R | EcoZ144ORF4685P (100% identity) | CCWGG | Eco47C09ORF4020P |
| 4030 | 321 aa hypothetical protein | |||
| 5045 | copper-exporting P-type ATPase CopA | |||
| 5050 | M | M.Eco47C15ORF5070P (100% identity) | M.Eco47C09ORF5050P | |
| 5055 | ogr/Delta-like zinc finger family protein | |||
| 12735 | drug/metabolite exporter YedA | |||
| 12740 | V | V.Ecos195DcmP (100% identity) | V.Eco47C09DcmP | |
| 12745 | M | M.Ecos67DcmP (100% identity) | CCWGG | M.Eco47C09DcmP |
| 12750 | phosphohydrolase | |||
| 19045 | DNA-binding transcriptional regulator Fis | |||
| 19050 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Eco47C09ORF19050P |
| 19055 | DUF2556 family protein | |||
| 19670 | ribulose-phosphate 3-epimerase | |||
| 19675 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco47C09DamP |
| 19680 | cell division protein DamX | |||
| plasmid unnamed1 | ||||
| 22935 | group II intron reverse transcriptase/maturase | |||
| 22940 | M | M.SenBR027ORFEP (89% identity) | M.Eco47C09ORF22940P | |
| 22945 | 73 aa hypothetical protein | |||
| plasmid unnamed2 | ||||
| 23730 | 73 aa hypothetical protein | |||
| 23735 | M | M.SflN92ORF24820P (89% identity) | M.Eco47C09ORF23735P | |
| 23740 | group II intron reverse transcriptase/maturase | |||
| plasmid unnamed3 | ||||
| 24015 | group II intron reverse transcriptase/maturase | |||
| 24020 | M | M.Ecoppa9ORF24505P (89% identity) | M.Eco47C09ORF24020P | |
| 24025 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1400 | zinc-ribbon domain-containing protein | |||
| 1405 | R | Eco47SOC04McrBP (100% identity) | Eco47C09McrBP | |
| 1410 | R | Eco47SOC04McrCP (100% identity) | Eco47C09McrCP | |
| 1415 | type I restriction-modification system subunit M | |||