Escherichia coli RHB46-C23 |
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Putative Escherichia coli RHB46-C23 RM systems
Ref: Matlock,W. unpublished
REBASE ref # 36523
| Sequence length: | GenBank #: | |
| Chromosome: | 4,788,431 bp | CP098965 |
| plasmid unnamed1: | 164,819 bp | CP098966 |
REBASE acronym: Eco46C23
Org_num: 66541
All begin NFL53_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3410 | transposase domain-containing protein | |||
| 3415 | M | M.SenSI170ORF3660P (100% identity) | AGGNNNNNRTTG | M.Eco46C23ORF3415P |
| 3420 | AAA family ATPase | |||
| 3425 | S | S2.SenSI170ORF3660P (100% identity) | AGGNNNNNRTTG | S.Eco46C23ORF3415P |
| 3430 | R | SenSI170ORF3660P (100% identity) | AGGNNNNNRTTG | Eco46C23ORF3415P |
| 3435 | IS3 family transposase | |||
| plasmid unnamed1 | ||||
| 23260 | M48 family metallopeptidase | |||
| 23265 | R | Eco44C14ORF23150P (100% identity) | GATGNNNNNCTG | Eco46C23ORF23275P |
| 23270 | S | S.Sen59ORF24615P (100% identity) | GATGNNNNNCTG | S.Eco46C23ORF23275P |
| 23275 | M | M.Sen59ORF24615P (100% identity) | GATGNNNNNCTG | M.Eco46C23ORF23275P |
| 23280 | IS3 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1710 | cell division protein DamX | |||
| 1715 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco46C23DamP |
| 1720 | ribulose-phosphate 3-epimerase | |||
| 2265 | DUF2556 family protein | |||
| 2270 | M | M.SflWW1ORF2205P (100% identity) | ATGCAT | M.Eco46C23ORF2270P |
| 2275 | DNA-binding transcriptional regulator Fis | |||
| 9690 | DUF977 family protein | |||
| 9695 | M | M.Eco44C14ORF10020P (99% identity) | M.Eco46C23ORF9695P | |
| 9700 | 155 aa hypothetical protein | |||
| 15170 | 70 aa hypothetical protein | |||
| 15175 | M | M.EclZ1LORF11920P (100% identity) | M.Eco46C23ORF15175P | |
| 15180 | DUF3850 domain-containing protein | |||
| 17925 | phage terminase large subunit | |||
| 17930 | M | M.Eal22ORF9305P (99% identity) | M.Eco46C23ORF17930P | |
| 17935 | DUF1804 family protein | |||
| 20180 | HNH endonuclease | |||
| 20185 | R | EcoSTEC384ORFHP (96% identity) | Eco46C23ORF20185P | |
| 20190 | peptidase | |||
| 20190 | peptidase | |||
| 20195 | M | M.EcoXH993ORF23960P (100% identity) | RCCGGY | M.Eco46C23ORF20195P |
| 20200 | R | R2.EcoXH993ORF23960P (100% identity) | RCCGGY | Eco46C23ORF20195P |
| 20205 | integrase core domain-containing protein | |||
| plasmid unnamed1 | ||||
| 23960 | recombination protein NinB | |||
| 23965 | M | M.Eco44C14ORF23840P (100% identity) | GATC | M.Eco46C23ORF23965P |
| 23970 | NinE family protein | |||