Escherichia marmotae RHB35-E2-C08 |
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Putative Escherichia marmotae RHB35-E2-C08 RM systems
Ref: Matlock,W. unpublished
REBASE ref # 36523
| Sequence length: | GenBank #: | |
| Chromosome: | 4,884,850 bp | CP099344 |
| plasmid unnamed1: | 98,156 bp | CP099345 |
| plasmid unnamed2: | 72,595 bp | CP099346 |
REBASE acronym: EmaE2C08
Org_num: 66610
All begin NFK54_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18060 | endoribonuclease SymE | |||
| 18065 | S | S.Eal35ORF19315P (66% identity) | S.EmaE2C08ORF18070P | |
| 18070 | M | M.EmaW492ORF3485P (100% identity) | M.EmaE2C08ORF18070P | |
| 18075 | R | EmaYF8ORF2785P (99% identity) | EmaE2C08ORF18070P | |
| 18080 | adenine/cytosine-specific restriction | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5220 | drug/metabolite exporter YedA | |||
| 5225 | V | V.Ema777DcmP (100% identity) | V.EmaE2C08DcmP | |
| 5230 | M | M.Esp9308DcmP (100% identity) | CCWGG | M.EmaE2C08DcmP |
| 5235 | phosphohydrolase | |||
| 12040 | DNA-binding transcriptional regulator Fis | |||
| 12045 | M | M.Esp9308ORFJP (100% identity) | ATGCAT | M.EmaE2C08ORF12045P |
| 12050 | DUF2556 family protein | |||
| 12570 | ribulose-phosphate 3-epimerase | |||
| 12575 | M | M.Esp9308DamP (100% identity) | GATC | M.EmaE2C08DamP |
| 12580 | cell division protein DamX | |||
| 17800 | integrase arm-type DNA-binding domain-containing | |||
| 17805 | M | M.BspHR94ORF2370P (100% identity) | M.EmaE2C08ORF17805P | |
| 17810 | McrC family protein | |||
| 22965 | DUF3850 domain-containing protein | |||
| 22970 | M | M.EcoC213ORF15325P (99% identity) | GATC | M.EmaE2C08ORF22970P |
| 22975 | replication endonuclease | |||
| plasmid unnamed1 | ||||
| 23755 | 103 aa hypothetical protein | |||
| 23760 | M | M.Kpn1026ORFJP (100% identity) | M.EmaE2C08ORF23760P | |
| 23765 | 73 aa hypothetical protein | |||
| plasmid unnamed2 | ||||
| 24225 | 103 aa hypothetical protein | |||
| 24230 | M | M.Kpn1026ORFJP (100% identity) | M.EmaE2C08ORF24230P | |
| 24235 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1500 | tail fiber assembly protein | |||
| 1505 | R | EcoSCU152McrBP (100% identity) | EmaE2C08McrBP | |
| 1510 | R | EcoteDMcrCP (100% identity) | EmaE2C08McrCP | |
| 1515 | isocitrate/isopropylmalate family dehydrogenase | |||
| 5930 | 115 aa hypothetical protein | |||
| 5935 | R | EfeE4C07ORF13385P (100% identity) | EmaE2C08ORF5935P | |
| 5940 | tyrosine-type recombinase/integrase | |||
| 18045 | DUF1127 domain-containing protein | |||
| ??? | R | EcoA34GmrSDP (91% identity) | EmaE2C08GmrSDP | |
| 18060 | endoribonuclease SymE | |||