Escherichia coli RHB44-C13 |
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Putative Escherichia coli RHB44-C13 RM systems
Ref: Matlock,W. unpublished
REBASE ref # 36523
| Sequence length: | GenBank #: | |
| Chromosome: | 4,819,786 bp | CP099051 |
| plasmid unnamed2: | 98,362 bp | CP099053 |
REBASE acronym: Eco44C13
Org_num: 66510
All begin NFK99_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11145 | adenine/cytosine-specific restriction | |||
| 11150 | R | Ssp28760ORF3465P (100% identity) | TGANNNNNNNNTGCT | Eco44C13ORF11155P |
| 11155 | M | M.Ssp28760ORF3465P (100% identity) | TGANNNNNNNNTGCT | M.Eco44C13ORF11155P |
| 11160 | S | S.EcoPI7ORF12065P (100% identity) | TGANNNNNNNNTGCT | S.Eco44C13ORF11155P |
| 11165 | endoribonuclease SymE | |||
| 15060 | DNA-binding protein | |||
| 15065 | M | M.EcoS19651ORF13565P (100% identity) | GACNNNNNTRRG | M.Eco44C13ORF15065P |
| 15070 | S | S.EcoS19651ORF13565P (100% identity) | GACNNNNNTRRG | S.Eco44C13ORF15065P |
| 15075 | R | EcoC19ORF660P (100% identity) | GACNNNNNTRRG | Eco44C13ORF15065P |
| 15080 | IS66 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 815 | phosphohydrolase | |||
| 820 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco44C13DcmP |
| 825 | V | V.SflFF59DcmP (100% identity) | CCWGG | V.Eco44C13DcmP |
| 830 | drug/metabolite exporter YedA | |||
| 16680 | cell division protein DamX | |||
| 16685 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco44C13DamP |
| 16690 | ribulose-phosphate 3-epimerase | |||
| plasmid unnamed2 | ||||
| 23940 | recombination-associated protein RdgC | |||
| 23945 | M | M.Eco44C17ORF24390P (100% identity) | M.Eco44C13ORF23945P | |
| 23960 | SPFH domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11140 | GTPase | |||
| 11145 | R | EcoPI7MrrP (100% identity) | Eco44C13MrrP | |
| 11150 | type I restriction-modification system | |||
| 11165 | endoribonuclease SymE | |||
| 11170 | R | Ssp28760McrBP (100% identity) | Eco44C13McrBP | |
| 11175 | R | Ssp28760McrCP (100% identity) | Eco44C13McrCP | |