Escherichia coli RHB44-C14 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli RHB44-C14 RM systems
Ref: Matlock,W. unpublished
REBASE ref # 36523
| Sequence length: | GenBank #: | |
| Chromosome: | 4,758,328 bp | CP099046 |
| plasmid unnamed1: | 165,319 bp | CP099047 |
REBASE acronym: Eco44C14
Org_num: 66511
All begin NFL00_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3410 | transposase domain-containing protein | |||
| 3415 | M | M.SenSI170ORF3660P (100% identity) | AGGNNNNNRTTG | M.Eco44C14ORF3415P |
| 3420 | AAA family ATPase | |||
| 3425 | S | S2.SenSI170ORF3660P (100% identity) | AGGNNNNNRTTG | S.Eco44C14ORF3415P |
| 3430 | R | SenSI170ORF3660P (100% identity) | AGGNNNNNRTTG | Eco44C14ORF3415P |
| 3435 | IS3 family transposase | |||
| plasmid unnamed1 | ||||
| 23135 | M48 family metallopeptidase | |||
| 23140 | R | Eco46C23ORF23275P (100% identity) | GATGNNNNNCTG | Eco44C14ORF23150P |
| 23145 | S | S.Sen59ORF24615P (100% identity) | GATGNNNNNCTG | S.Eco44C14ORF23150P |
| 23150 | M | M.Sen59ORF24615P (100% identity) | GATGNNNNNCTG | M.Eco44C14ORF23150P |
| 23155 | IS3 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1710 | cell division protein DamX | |||
| 1715 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco44C14DamP |
| 1720 | ribulose-phosphate 3-epimerase | |||
| 2265 | DUF2556 family protein | |||
| 2270 | M | M.SflWW1ORF2205P (100% identity) | ATGCAT | M.Eco44C14ORF2270P |
| 2275 | DNA-binding transcriptional regulator Fis | |||
| 7250 | recombination protein NinB | |||
| 7255 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco44C14ORF7255P |
| 7260 | NinE family protein | |||
| 9335 | phosphohydrolase | |||
| 9340 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco44C14DcmP |
| 9345 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.Eco44C14DcmP |
| 9350 | drug/metabolite exporter YedA | |||
| 10015 | DUF977 family protein | |||
| 10020 | M | M.Eco46C23ORF9695P (99% identity) | M.Eco44C14ORF10020P | |
| 10025 | 155 aa hypothetical protein | |||
| 20055 | HNH endonuclease | |||
| 20060 | R | EcoSTEC384ORFHP (96% identity) | Eco44C14ORF20060P | |
| 20065 | peptidase | |||
| plasmid unnamed1 | ||||
| 23835 | recombination protein NinB | |||
| 23840 | M | M.Eco46C23ORF23965P (100% identity) | GATC | M.Eco44C14ORF23840P |
| 23845 | NinE family protein | |||