Citrobacter freundii RHB16-SO-C03 |
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Putative Citrobacter freundii RHB16-SO-C03 RM systems
Ref: Matlock,W. unpublished
REBASE ref # 36523
| Sequence length: | GenBank #: | |
| Chromosome: | 5,155,564 bp | CP099217 |
| plasmid unnamed1: | 217,792 bp | CP099218 |
REBASE acronym: CbrSOC03
Org_num: 66289
All begin NFJ87_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4565 | 187 aa hypothetical protein | |||
| 4570 | R | Ror0ORF4532P (98% identity) | CbrSOC03ORF4580P | |
| 4575 | S | S.KquS1741ORFBP (98% identity) | S1.CbrSOC03ORF4580P | |
| 4580 | M | M.KquS1741ORFBP (98% identity) | M.CbrSOC03ORF4580P | |
| 4585 | S | S2.KpnK089ORFAP (97% identity) | S2.CbrSOC03ORF4580P | |
| 4590 | helix-turn-helix domain containing protein | |||
| 5355 | 490 aa hypothetical protein | |||
| 5360 | M | M.EkoS19ORF18095P (98% identity) | M.CbrSOC03ORF5360P | |
| 5365 | S | S.EkoS19ORF18095P (95% identity) | S.CbrSOC03ORF5360P | |
| 5370 | AAA family ATPase | |||
| 21220 | restriction endonuclease | |||
| 21225 | R | CfrR47ORF11150P (99% identity) | CbrSOC03ORF21230P | |
| 21230 | M | M.CfrR47ORF11150P (99% identity) | M.CbrSOC03ORF21230P | |
| 21235 | S | S.Cfr402ORF3900P (99% identity) | S.CbrSOC03ORF21230P | |
| 21240 | endoribonuclease SymE | |||
| 22565 | SIR2 family protein | |||
| 22570 | S | S.EhoG17ORF4570P (98% identity) | S.CbrSOC03ORF22575P | |
| 22575 | M | M.EhoG17ORF4570P (99% identity) | M.CbrSOC03ORF22575P | |
| 22580 | R | EhoG17ORF4570P (100% identity) | CbrSOC03ORF22575P | |
| 22585 | toll/interleukin-1 receptor domain-containing | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2330 | DUF2556 family protein | |||
| 2335 | M | M.CspLUTT5ORF2195P (100% identity) | ATGCAT | M.CbrSOC03ORF2335P |
| 2340 | site-specific integrase | |||
| 6210 | TraR/DksA family transcriptional regulator | |||
| 6215 | M | M.SenSL491ORF2393P (98% identity) | M.CbrSOC03ORF6215P | |
| 6220 | replication endonuclease | |||
| 6825 | recombination protein NinG | |||
| 6830 | M | M.Cpo163ORF12950P (99% identity) | M.CbrSOC03ORF6830P | |
| 6835 | antitermination protein | |||
| 9910 | phosphohydrolase | |||
| 9915 | M | M.CfrLORF9975P (100% identity) | CCWGG | M.CbrSOC03ORF9915P |
| 9920 | V | V.CspS39ORF13780P (100% identity) | CCWGG | V.CbrSOC03ORF9915P |
| 9925 | drug/metabolite exporter YedA | |||
| 10600 | 103 aa hypothetical protein | |||
| 10605 | M | M.CcrS1751ORFGP (81% identity) | M.CbrSOC03ORF10605P | |
| 10610 | DUF550 domain-containing protein | |||
| 18210 | DUF1317 domain-containing protein | |||
| 18215 | M | M.ExiPC4LORF17660P (98% identity) | M.CbrSOC03ORF18215P | |
| 18220 | 72 aa hypothetical protein | |||
| 21395 | HNH endonuclease | |||
| 21400 | R | Cfr3863ORF20535P (98% identity) | CbrSOC03ORF21400P | |
| 21405 | helix-turn-helix transcriptional regulator | |||
| plasmid unnamed1 | ||||
| 25410 | DNA polymerase III subunit beta | |||
| 25415 | M | M.Sen3039ORF24445P (100% identity) | GATC | M.CbrSOC03ORF25415P |
| 25420 | 76 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4545 | DUF4234 domain-containing protein | |||
| 4550 | R | Kmi647McrC2P (98% identity) | CbrSOC03McrCP | |
| 4555 | R | Kpn19AMcrBP (99% identity) | CbrSOC03McrBP | |
| 4560 | ATP F0F1 synthase synthase | |||
| 21215 | BrnA antitoxin family protein | |||
| 21220 | R | CfrC05MrrP (100% identity) | CbrSOC03MrrP | |
| 21225 | DEAD/DEAH box helicase family protein | |||