Salmonella enterica S1_VPH_Chula |
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Putative Salmonella enterica S1_VPH_Chula RM systems
Ref: Kiatyingangsulee,T. and Chuanchuen,R. unpublished
REBASE ref # 36628
| Sequence length: | GenBank #: | |
| Chromosome: | 4,810,369 bp | CP121415 |
| plasmid unnamed1: | 293,619 bp | CP121416 |
REBASE acronym: SenS1VPH
Org_num: 66826
All begin QAT86_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19695 | 322 aa hypothetical protein | |||
| 19700 | R | SspA292ORF20040P (100% identity) | GAYANNNNNNNNGTGG | SenS1VPHORF19705P |
| 19705 | M | M.SspA292ORF20040P (100% identity) | GAYANNNNNNNNGTGG | M.SenS1VPHORF19705P |
| 19710 | S | S.SspA292ORF20040P (100% identity) | GAYANNNNNNNNGTGG | S.SenS1VPHORF19705P |
| 19715 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1775 | cell division protein DamX | |||
| 1780 | M | M.StyTDamP (100% identity) | GATC | M.SenS1VPHDamP |
| 1785 | ribulose-phosphate 3-epimerase | |||
| 3270 | DUF2732 family protein | |||
| 3275 | M | M.SenUA39ORF1528P (100% identity) | GATC | M.SenS1VPHORF3275P |
| 3280 | replication endonuclease | |||
| 7180 | NinE family protein | |||
| 7185 | M | M.SspA292ORF7010P (100% identity) | M.SenS1VPHORF7185P | |
| 7190 | protein NinF | |||
| 9500 | phosphohydrolase | |||
| 9505 | M | M.SspZ54DcmP (100% identity) | CCWGG | M.SenS1VPHDcmP |
| 9510 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.SenS1VPHDcmP |
| 9515 | drug/metabolite exporter YedA | |||
| 19835 | YebC/PmpR family DNA-binding transcriptional | |||
| 19840 | R | SspA292ORF20185P (100% identity) | SenS1VPHORF19840P | |
| 19845 | malate transporter | |||
| 19865 | BREX system P-loop protein BrxC | |||
| 19870 | RM | SspA292ORF20215P (100% identity) | GAANCAG | SenS1VPHORF19870P |
| 19875 | AAA family ATPase | |||
| plasmid unnamed1 | ||||
| 24065 | 55 aa hypothetical protein | |||
| 24070 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.SenS1VPHORF24070P |
| 24075 | thermonuclease family protein | |||
| 24645 | IS5 family transposase | |||
| 24650 | M | M.YpsF1ORFBP (100% identity) | M.SenS1VPHORF24650P | |
| 24655 | 202 aa hypothetical protein | |||
| 24780 | DNA-binding protein | |||
| 24785 | M | M.YpsF1ORFDP (100% identity) | GATC | M.SenS1VPHORF24785P |
| 24790 | 284 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17325 | small effector SsaA | |||
| 17330 | R | SspA292ORF17210P (100% identity) | CAGAG | SenS1VPHORF17335P |
| 17335 | M | M.SspA292ORF17210P (100% identity) | CAGAG | M.SenS1VPHORF17335P |
| 17340 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19895 | phospholipase D-like domain-containing protein | |||
| 19900 | R | SenTY27MrrP (100% identity) | SenS1VPHMrrP | |
| 19905 | AAA domain-containing protein | |||